Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Trav3-3Q5R1C3 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav3-3Q5R1C3 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav3-3Q5R1C3 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav3-3Q5R1C3 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC10.91□□□□□ -0.66
Trav3-3Q5R1C3 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Trav3-3Q5R1C3 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav3-3Q5R1C3 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Trav3-3Q5R1C3 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Trav3-3Q5R1C3 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav3-3Q5R1C3 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav3-3Q5R1C3 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Trav3-3Q5R1C3 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav3-3Q5R1C3 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav3-3Q5R1C3 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Trav3-3Q5R1C3 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav3-3Q5R1C3 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav3-3Q5R1C3 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Trav3-3Q5R1C3 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Trav3-3Q5R1C3 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav3-3Q5R1C3 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav3-3Q5R1C3 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC10.91□□□□□ -0.66
Trav3-3Q5R1C3 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav3-3Q5R1C3 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC10.91□□□□□ -0.66
Trav3-3Q5R1C3 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav3-3Q5R1C3 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Trav3-3Q5R1C3 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC10.91□□□□□ -0.66
Trav3-3Q5R1C3 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC10.91□□□□□ -0.66
Trav3-3Q5R1C3 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC10.91□□□□□ -0.66
Trav3-3Q5R1C3 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav3-3Q5R1C3 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav3-3Q5R1C3 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav3-3Q5R1C3 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav3-3Q5R1C3 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav3-3Q5R1C3 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav3-3Q5R1C3 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav3-3Q5R1C3 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC10.91□□□□□ -0.66
Trav3-3Q5R1C3 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Trav3-3Q5R1C3 Gm18263-201ENSMUST00000220846 1928 ntBASIC10.91□□□□□ -0.66
Trav3-3Q5R1C3 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav3-3Q5R1C3 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC10.91□□□□□ -0.66
Trav3-3Q5R1C3 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav3-3Q5R1C3 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav3-3Q5R1C3 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Trav3-3Q5R1C3 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav3-3Q5R1C3 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav3-3Q5R1C3 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav3-3Q5R1C3 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav3-3Q5R1C3 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Trav3-3Q5R1C3 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav3-3Q5R1C3 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav3-3Q5R1C3 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Trav3-3Q5R1C3 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC10.91□□□□□ -0.66
Trav3-3Q5R1C3 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav3-3Q5R1C3 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav3-3Q5R1C3 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC10.9□□□□□ -0.66
Trav3-3Q5R1C3 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Trav3-3Q5R1C3 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav3-3Q5R1C3 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav3-3Q5R1C3 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav3-3Q5R1C3 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav3-3Q5R1C3 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav3-3Q5R1C3 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Trav3-3Q5R1C3 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav3-3Q5R1C3 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav3-3Q5R1C3 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Trav3-3Q5R1C3 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Trav3-3Q5R1C3 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Trav3-3Q5R1C3 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav3-3Q5R1C3 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC10.9□□□□□ -0.66
Trav3-3Q5R1C3 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav3-3Q5R1C3 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC10.9□□□□□ -0.66
Trav3-3Q5R1C3 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav3-3Q5R1C3 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Trav3-3Q5R1C3 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC10.9□□□□□ -0.66
Trav3-3Q5R1C3 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC10.9□□□□□ -0.66
Trav3-3Q5R1C3 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav3-3Q5R1C3 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC10.9□□□□□ -0.66
Trav3-3Q5R1C3 Gm9484-201ENSMUST00000195892 1159 ntBASIC10.9□□□□□ -0.66
Trav3-3Q5R1C3 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Trav3-3Q5R1C3 Gm21559-201ENSMUST00000220638 855 ntBASIC10.9□□□□□ -0.66
Trav3-3Q5R1C3 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav3-3Q5R1C3 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav3-3Q5R1C3 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav3-3Q5R1C3 Gm8587-201ENSMUST00000076538 843 ntBASIC10.9□□□□□ -0.66
Trav3-3Q5R1C3 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Trav3-3Q5R1C3 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Trav3-3Q5R1C3 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav3-3Q5R1C3 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav3-3Q5R1C3 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC10.9□□□□□ -0.66
Trav3-3Q5R1C3 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Trav3-3Q5R1C3 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Trav3-3Q5R1C3 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav3-3Q5R1C3 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC10.9□□□□□ -0.67
Trav3-3Q5R1C3 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.67
Trav3-3Q5R1C3 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Trav3-3Q5R1C3 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Trav3-3Q5R1C3 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC10.9□□□□□ -0.67
Trav3-3Q5R1C3 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.67
Trav3-3Q5R1C3 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC10.9□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms