Protein–RNA interactions for Protein: Q5PSV9

Mdc1, Mediator of DNA damage checkpoint protein 1, mousemouse

Predictions only

Length 1,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mdc1Q5PSV9 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Mdc1Q5PSV9 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Mdc1Q5PSV9 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC18.73■□□□□ 0.59
Mdc1Q5PSV9 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Mdc1Q5PSV9 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Mdc1Q5PSV9 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Mdc1Q5PSV9 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Mdc1Q5PSV9 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Mdc1Q5PSV9 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC18.72■□□□□ 0.59
Mdc1Q5PSV9 Gm9109-201ENSMUST00000120254 1405 ntBASIC18.72■□□□□ 0.59
Mdc1Q5PSV9 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Mdc1Q5PSV9 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC18.72■□□□□ 0.59
Mdc1Q5PSV9 Ighv1-51-201ENSMUST00000192903 354 ntBASIC18.72■□□□□ 0.59
Mdc1Q5PSV9 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC18.72■□□□□ 0.59
Mdc1Q5PSV9 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Mdc1Q5PSV9 AC114008.2-201ENSMUST00000227699 1347 ntBASIC18.72■□□□□ 0.59
Mdc1Q5PSV9 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Mdc1Q5PSV9 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Mdc1Q5PSV9 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Mdc1Q5PSV9 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Mdc1Q5PSV9 Gm45630-201ENSMUST00000210243 1911 ntBASIC18.72■□□□□ 0.59
Mdc1Q5PSV9 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Mdc1Q5PSV9 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC18.71■□□□□ 0.59
Mdc1Q5PSV9 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC18.71■□□□□ 0.59
Mdc1Q5PSV9 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Mdc1Q5PSV9 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Mdc1Q5PSV9 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Mdc1Q5PSV9 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Mdc1Q5PSV9 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Mdc1Q5PSV9 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Mdc1Q5PSV9 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Mdc1Q5PSV9 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Mdc1Q5PSV9 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Mdc1Q5PSV9 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Mdc1Q5PSV9 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Mdc1Q5PSV9 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Mdc1Q5PSV9 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Mdc1Q5PSV9 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC18.71■□□□□ 0.59
Mdc1Q5PSV9 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Mdc1Q5PSV9 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Mdc1Q5PSV9 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC18.71■□□□□ 0.59
Mdc1Q5PSV9 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Mdc1Q5PSV9 AC161252.3-201ENSMUST00000225465 1549 ntBASIC18.71■□□□□ 0.59
Mdc1Q5PSV9 Gm8775-201ENSMUST00000170943 1327 ntBASIC18.71■□□□□ 0.59
Mdc1Q5PSV9 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Mdc1Q5PSV9 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Mdc1Q5PSV9 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Mdc1Q5PSV9 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC18.7■□□□□ 0.58
Mdc1Q5PSV9 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Mdc1Q5PSV9 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Mdc1Q5PSV9 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Mdc1Q5PSV9 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Mdc1Q5PSV9 Gm15198-201ENSMUST00000117283 177 ntBASIC18.7■□□□□ 0.58
Mdc1Q5PSV9 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Mdc1Q5PSV9 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC18.7■□□□□ 0.58
Mdc1Q5PSV9 Gm18307-201ENSMUST00000206864 949 ntBASIC18.7■□□□□ 0.58
Mdc1Q5PSV9 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC18.7■□□□□ 0.58
Mdc1Q5PSV9 Gm10478-201ENSMUST00000084451 396 ntBASIC18.7■□□□□ 0.58
Mdc1Q5PSV9 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Mdc1Q5PSV9 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC18.7■□□□□ 0.58
Mdc1Q5PSV9 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Mdc1Q5PSV9 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC18.69■□□□□ 0.58
Mdc1Q5PSV9 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Mdc1Q5PSV9 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Mdc1Q5PSV9 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Mdc1Q5PSV9 Gm27839-201ENSMUST00000184242 106 ntBASIC18.69■□□□□ 0.58
Mdc1Q5PSV9 Gm6983-201ENSMUST00000214912 628 ntBASIC18.69■□□□□ 0.58
Mdc1Q5PSV9 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Mdc1Q5PSV9 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Mdc1Q5PSV9 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Mdc1Q5PSV9 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Mdc1Q5PSV9 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Mdc1Q5PSV9 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Mdc1Q5PSV9 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Mdc1Q5PSV9 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Mdc1Q5PSV9 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Mdc1Q5PSV9 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Mdc1Q5PSV9 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Mdc1Q5PSV9 AC121801.1-201ENSMUST00000225363 1899 ntBASIC18.69■□□□□ 0.58
Mdc1Q5PSV9 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Mdc1Q5PSV9 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Mdc1Q5PSV9 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Mdc1Q5PSV9 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
Mdc1Q5PSV9 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC18.69■□□□□ 0.58
Mdc1Q5PSV9 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC18.69■□□□□ 0.58
Mdc1Q5PSV9 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC18.69■□□□□ 0.58
Mdc1Q5PSV9 Gm27892-201ENSMUST00000185017 106 ntBASIC18.69■□□□□ 0.58
Mdc1Q5PSV9 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Mdc1Q5PSV9 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC18.68■□□□□ 0.58
Mdc1Q5PSV9 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Mdc1Q5PSV9 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Mdc1Q5PSV9 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Mdc1Q5PSV9 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Mdc1Q5PSV9 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Mdc1Q5PSV9 Gm44645-201ENSMUST00000205492 1653 ntBASIC18.68■□□□□ 0.58
Mdc1Q5PSV9 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC18.68■□□□□ 0.58
Mdc1Q5PSV9 Gm27772-201ENSMUST00000184900 187 ntBASIC18.68■□□□□ 0.58
Mdc1Q5PSV9 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC18.68■□□□□ 0.58
Mdc1Q5PSV9 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC18.68■□□□□ 0.58
Mdc1Q5PSV9 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms