Protein–RNA interactions for Protein: Q4ACU6

Shank3, SH3 and multiple ankyrin repeat domains protein 3, mousemouse

Predictions only

Length 1,730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank3Q4ACU6 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC17.71■□□□□ 0.43
Shank3Q4ACU6 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC17.71■□□□□ 0.43
Shank3Q4ACU6 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
Shank3Q4ACU6 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Shank3Q4ACU6 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Shank3Q4ACU6 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Shank3Q4ACU6 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Shank3Q4ACU6 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Shank3Q4ACU6 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Shank3Q4ACU6 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
Shank3Q4ACU6 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Shank3Q4ACU6 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Shank3Q4ACU6 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Shank3Q4ACU6 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC17.7■□□□□ 0.42
Shank3Q4ACU6 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Shank3Q4ACU6 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Shank3Q4ACU6 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Shank3Q4ACU6 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Shank3Q4ACU6 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Shank3Q4ACU6 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC17.7■□□□□ 0.42
Shank3Q4ACU6 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Shank3Q4ACU6 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Shank3Q4ACU6 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Shank3Q4ACU6 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Shank3Q4ACU6 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC17.7■□□□□ 0.42
Shank3Q4ACU6 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Shank3Q4ACU6 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Shank3Q4ACU6 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Shank3Q4ACU6 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Shank3Q4ACU6 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Shank3Q4ACU6 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Shank3Q4ACU6 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Shank3Q4ACU6 Gm15236-201ENSMUST00000117309 379 ntBASIC17.69■□□□□ 0.42
Shank3Q4ACU6 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
Shank3Q4ACU6 Gm11557-201ENSMUST00000120200 1008 ntBASIC17.69■□□□□ 0.42
Shank3Q4ACU6 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC17.69■□□□□ 0.42
Shank3Q4ACU6 Gm7584-201ENSMUST00000175829 940 ntBASIC17.69■□□□□ 0.42
Shank3Q4ACU6 Gm8927-201ENSMUST00000181978 981 ntBASIC17.69■□□□□ 0.42
Shank3Q4ACU6 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC17.69■□□□□ 0.42
Shank3Q4ACU6 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Shank3Q4ACU6 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC17.69■□□□□ 0.42
Shank3Q4ACU6 Gm38671-201ENSMUST00000200573 130 ntBASIC17.69■□□□□ 0.42
Shank3Q4ACU6 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC17.69■□□□□ 0.42
Shank3Q4ACU6 CT030704.2-201ENSMUST00000228887 494 ntBASIC17.69■□□□□ 0.42
Shank3Q4ACU6 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Shank3Q4ACU6 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Shank3Q4ACU6 Gm3222-201ENSMUST00000071282 990 ntBASIC17.69■□□□□ 0.42
Shank3Q4ACU6 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Shank3Q4ACU6 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Shank3Q4ACU6 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Shank3Q4ACU6 Gm9109-201ENSMUST00000120254 1405 ntBASIC17.69■□□□□ 0.42
Shank3Q4ACU6 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Shank3Q4ACU6 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC17.69■□□□□ 0.42
Shank3Q4ACU6 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Shank3Q4ACU6 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Shank3Q4ACU6 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Shank3Q4ACU6 Gm6013-201ENSMUST00000212264 699 ntBASIC17.69■□□□□ 0.42
Shank3Q4ACU6 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Shank3Q4ACU6 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Shank3Q4ACU6 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Shank3Q4ACU6 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Shank3Q4ACU6 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Shank3Q4ACU6 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Shank3Q4ACU6 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Shank3Q4ACU6 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Shank3Q4ACU6 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Shank3Q4ACU6 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Shank3Q4ACU6 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Shank3Q4ACU6 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Shank3Q4ACU6 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Shank3Q4ACU6 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
Shank3Q4ACU6 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Shank3Q4ACU6 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC17.68■□□□□ 0.42
Shank3Q4ACU6 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Shank3Q4ACU6 Gm27682-201ENSMUST00000183930 110 ntBASIC17.68■□□□□ 0.42
Shank3Q4ACU6 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Shank3Q4ACU6 Gm29649-201ENSMUST00000185649 419 ntBASIC17.68■□□□□ 0.42
Shank3Q4ACU6 Gm44397-201ENSMUST00000195950 113 ntBASIC17.68■□□□□ 0.42
Shank3Q4ACU6 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC17.68■□□□□ 0.42
Shank3Q4ACU6 AC155237.1-201ENSMUST00000226196 1279 ntBASIC17.68■□□□□ 0.42
Shank3Q4ACU6 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
Shank3Q4ACU6 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Shank3Q4ACU6 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Shank3Q4ACU6 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Shank3Q4ACU6 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Shank3Q4ACU6 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Shank3Q4ACU6 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Shank3Q4ACU6 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Shank3Q4ACU6 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Shank3Q4ACU6 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Shank3Q4ACU6 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC17.67■□□□□ 0.42
Shank3Q4ACU6 Gm11793-201ENSMUST00000120433 981 ntBASIC17.67■□□□□ 0.42
Shank3Q4ACU6 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Shank3Q4ACU6 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Shank3Q4ACU6 Gm29705-201ENSMUST00000212598 474 ntBASIC17.67■□□□□ 0.42
Shank3Q4ACU6 AC073947.2-201ENSMUST00000215888 1130 ntBASIC17.67■□□□□ 0.42
Shank3Q4ACU6 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Shank3Q4ACU6 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Shank3Q4ACU6 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Shank3Q4ACU6 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms