Protein–RNA interactions for Protein: Q3UV31

Rnf223, RING finger protein 223, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf223Q3UV31 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.16
Rnf223Q3UV31 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rnf223Q3UV31 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rnf223Q3UV31 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rnf223Q3UV31 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC14.08□□□□□ -0.16
Rnf223Q3UV31 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Rnf223Q3UV31 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rnf223Q3UV31 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rnf223Q3UV31 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Rnf223Q3UV31 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rnf223Q3UV31 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rnf223Q3UV31 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rnf223Q3UV31 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rnf223Q3UV31 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rnf223Q3UV31 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
Rnf223Q3UV31 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Rnf223Q3UV31 Gm7063-201ENSMUST00000186840 981 ntBASIC14.07□□□□□ -0.16
Rnf223Q3UV31 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Rnf223Q3UV31 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC14.07□□□□□ -0.16
Rnf223Q3UV31 Wdyhv1-203ENSMUST00000226889 394 ntBASIC14.07□□□□□ -0.16
Rnf223Q3UV31 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rnf223Q3UV31 Mir125a-201ENSMUST00000083545 68 ntBASIC14.07□□□□□ -0.16
Rnf223Q3UV31 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Rnf223Q3UV31 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Rnf223Q3UV31 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rnf223Q3UV31 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Rnf223Q3UV31 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rnf223Q3UV31 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rnf223Q3UV31 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Rnf223Q3UV31 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rnf223Q3UV31 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rnf223Q3UV31 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Rnf223Q3UV31 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rnf223Q3UV31 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rnf223Q3UV31 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rnf223Q3UV31 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rnf223Q3UV31 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rnf223Q3UV31 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rnf223Q3UV31 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rnf223Q3UV31 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rnf223Q3UV31 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rnf223Q3UV31 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC14.06□□□□□ -0.16
Rnf223Q3UV31 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Rnf223Q3UV31 Gm15653-201ENSMUST00000119247 907 ntBASIC14.06□□□□□ -0.16
Rnf223Q3UV31 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC14.06□□□□□ -0.16
Rnf223Q3UV31 Cd63-ps-201ENSMUST00000145417 875 ntBASIC14.06□□□□□ -0.16
Rnf223Q3UV31 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Rnf223Q3UV31 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC14.06□□□□□ -0.16
Rnf223Q3UV31 Mir6977-201ENSMUST00000184960 64 ntBASIC14.06□□□□□ -0.16
Rnf223Q3UV31 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
Rnf223Q3UV31 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC14.06□□□□□ -0.16
Rnf223Q3UV31 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rnf223Q3UV31 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rnf223Q3UV31 Gm13127-201ENSMUST00000118978 1389 ntBASIC14.06□□□□□ -0.16
Rnf223Q3UV31 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Rnf223Q3UV31 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rnf223Q3UV31 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC14.06□□□□□ -0.16
Rnf223Q3UV31 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rnf223Q3UV31 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Rnf223Q3UV31 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Rnf223Q3UV31 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rnf223Q3UV31 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rnf223Q3UV31 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Rnf223Q3UV31 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rnf223Q3UV31 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rnf223Q3UV31 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rnf223Q3UV31 Gm45751-201ENSMUST00000210185 1573 ntBASIC14.05□□□□□ -0.16
Rnf223Q3UV31 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rnf223Q3UV31 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rnf223Q3UV31 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC14.05□□□□□ -0.16
Rnf223Q3UV31 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC14.05□□□□□ -0.16
Rnf223Q3UV31 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Rnf223Q3UV31 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rnf223Q3UV31 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Rnf223Q3UV31 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Rnf223Q3UV31 Gm43703-201ENSMUST00000200523 763 ntBASIC14.05□□□□□ -0.16
Rnf223Q3UV31 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC14.05□□□□□ -0.16
Rnf223Q3UV31 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC14.05□□□□□ -0.16
Rnf223Q3UV31 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rnf223Q3UV31 Gm9768-201ENSMUST00000206007 2861 ntBASIC14.05□□□□□ -0.16
Rnf223Q3UV31 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Rnf223Q3UV31 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rnf223Q3UV31 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC14.05□□□□□ -0.16
Rnf223Q3UV31 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Rnf223Q3UV31 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rnf223Q3UV31 Gm10605-202ENSMUST00000183019 3198 ntBASIC14.05□□□□□ -0.16
Rnf223Q3UV31 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rnf223Q3UV31 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rnf223Q3UV31 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Rnf223Q3UV31 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Rnf223Q3UV31 BC001981-202ENSMUST00000191393 1545 ntBASIC14.05□□□□□ -0.16
Rnf223Q3UV31 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Rnf223Q3UV31 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Rnf223Q3UV31 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Rnf223Q3UV31 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Rnf223Q3UV31 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rnf223Q3UV31 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rnf223Q3UV31 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rnf223Q3UV31 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rnf223Q3UV31 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms