Protein–RNA interactions for Protein: Q3UNC9

Cks1brt, Cyclin-dependent kinases regulatory subunit, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1brtQ3UNC9 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Cks1brtQ3UNC9 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Cks1brtQ3UNC9 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Cks1brtQ3UNC9 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
Cks1brtQ3UNC9 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Cks1brtQ3UNC9 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Cks1brtQ3UNC9 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Cks1brtQ3UNC9 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Cks1brtQ3UNC9 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Cks1brtQ3UNC9 Gm10849-201ENSMUST00000100397 618 ntBASIC10.44□□□□□ -0.74
Cks1brtQ3UNC9 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC10.44□□□□□ -0.74
Cks1brtQ3UNC9 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC10.44□□□□□ -0.74
Cks1brtQ3UNC9 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC10.44□□□□□ -0.74
Cks1brtQ3UNC9 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Cks1brtQ3UNC9 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC10.44□□□□□ -0.74
Cks1brtQ3UNC9 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC10.44□□□□□ -0.74
Cks1brtQ3UNC9 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC10.44□□□□□ -0.74
Cks1brtQ3UNC9 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Cks1brtQ3UNC9 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC10.44□□□□□ -0.74
Cks1brtQ3UNC9 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC10.44□□□□□ -0.74
Cks1brtQ3UNC9 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Cks1brtQ3UNC9 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC10.44□□□□□ -0.74
Cks1brtQ3UNC9 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Cks1brtQ3UNC9 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Cks1brtQ3UNC9 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Cks1brtQ3UNC9 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Cks1brtQ3UNC9 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Cks1brtQ3UNC9 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC10.44□□□□□ -0.74
Cks1brtQ3UNC9 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Cks1brtQ3UNC9 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Cks1brtQ3UNC9 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Cks1brtQ3UNC9 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Cks1brtQ3UNC9 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC10.44□□□□□ -0.74
Cks1brtQ3UNC9 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC10.44□□□□□ -0.74
Cks1brtQ3UNC9 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
Cks1brtQ3UNC9 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Cks1brtQ3UNC9 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
Cks1brtQ3UNC9 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Cks1brtQ3UNC9 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Cks1brtQ3UNC9 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Cks1brtQ3UNC9 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Cks1brtQ3UNC9 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Cks1brtQ3UNC9 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Cks1brtQ3UNC9 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Cks1brtQ3UNC9 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
Cks1brtQ3UNC9 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Cks1brtQ3UNC9 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Cks1brtQ3UNC9 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Cks1brtQ3UNC9 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC10.43□□□□□ -0.74
Cks1brtQ3UNC9 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Cks1brtQ3UNC9 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Cks1brtQ3UNC9 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC10.43□□□□□ -0.74
Cks1brtQ3UNC9 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Cks1brtQ3UNC9 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC10.43□□□□□ -0.74
Cks1brtQ3UNC9 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC10.43□□□□□ -0.74
Cks1brtQ3UNC9 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Cks1brtQ3UNC9 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Cks1brtQ3UNC9 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Cks1brtQ3UNC9 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Cks1brtQ3UNC9 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Cks1brtQ3UNC9 Gm26571-201ENSMUST00000181399 666 ntBASIC10.43□□□□□ -0.74
Cks1brtQ3UNC9 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC10.43□□□□□ -0.74
Cks1brtQ3UNC9 Slc35b2-207ENSMUST00000226086 850 ntBASIC10.43□□□□□ -0.74
Cks1brtQ3UNC9 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Cks1brtQ3UNC9 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Cks1brtQ3UNC9 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Cks1brtQ3UNC9 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Cks1brtQ3UNC9 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Cks1brtQ3UNC9 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Cks1brtQ3UNC9 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Cks1brtQ3UNC9 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Cks1brtQ3UNC9 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Cks1brtQ3UNC9 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Cks1brtQ3UNC9 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Cks1brtQ3UNC9 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Cks1brtQ3UNC9 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Cks1brtQ3UNC9 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Cks1brtQ3UNC9 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Cks1brtQ3UNC9 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Cks1brtQ3UNC9 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC10.43□□□□□ -0.74
Cks1brtQ3UNC9 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Cks1brtQ3UNC9 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Cks1brtQ3UNC9 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Cks1brtQ3UNC9 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Cks1brtQ3UNC9 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
Cks1brtQ3UNC9 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Cks1brtQ3UNC9 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC10.42□□□□□ -0.74
Cks1brtQ3UNC9 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Cks1brtQ3UNC9 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
Cks1brtQ3UNC9 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
Cks1brtQ3UNC9 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Cks1brtQ3UNC9 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Cks1brtQ3UNC9 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Cks1brtQ3UNC9 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Cks1brtQ3UNC9 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Cks1brtQ3UNC9 Gm37660-201ENSMUST00000192754 1732 ntBASIC10.42□□□□□ -0.74
Cks1brtQ3UNC9 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC10.42□□□□□ -0.74
Cks1brtQ3UNC9 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
Cks1brtQ3UNC9 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Cks1brtQ3UNC9 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms