Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Gpr179-201ENSMUST00000093942 9219 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Trim63Q38HM4 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trim63Q38HM4 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC11.97□□□□□ -0.49
Trim63Q38HM4 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC11.97□□□□□ -0.49
Trim63Q38HM4 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim63Q38HM4 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
Trim63Q38HM4 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Trim63Q38HM4 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim63Q38HM4 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim63Q38HM4 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Trim63Q38HM4 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim63Q38HM4 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trim63Q38HM4 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Trim63Q38HM4 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Trim63Q38HM4 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim63Q38HM4 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC11.97□□□□□ -0.49
Trim63Q38HM4 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trim63Q38HM4 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim63Q38HM4 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim63Q38HM4 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Trim63Q38HM4 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Trim63Q38HM4 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC11.97□□□□□ -0.49
Trim63Q38HM4 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim63Q38HM4 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC11.97□□□□□ -0.49
Trim63Q38HM4 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim63Q38HM4 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trim63Q38HM4 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
Trim63Q38HM4 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC11.96□□□□□ -0.49
Trim63Q38HM4 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trim63Q38HM4 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Trim63Q38HM4 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trim63Q38HM4 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trim63Q38HM4 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trim63Q38HM4 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Trim63Q38HM4 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trim63Q38HM4 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trim63Q38HM4 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trim63Q38HM4 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trim63Q38HM4 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trim63Q38HM4 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC11.96□□□□□ -0.49
Trim63Q38HM4 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC11.96□□□□□ -0.49
Trim63Q38HM4 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC11.96□□□□□ -0.49
Trim63Q38HM4 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trim63Q38HM4 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trim63Q38HM4 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trim63Q38HM4 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trim63Q38HM4 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC11.96□□□□□ -0.49
Trim63Q38HM4 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
Trim63Q38HM4 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC11.96□□□□□ -0.5
Trim63Q38HM4 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Trim63Q38HM4 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trim63Q38HM4 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trim63Q38HM4 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
Trim63Q38HM4 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Trim63Q38HM4 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trim63Q38HM4 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trim63Q38HM4 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trim63Q38HM4 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trim63Q38HM4 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trim63Q38HM4 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trim63Q38HM4 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trim63Q38HM4 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trim63Q38HM4 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC11.95□□□□□ -0.5
Trim63Q38HM4 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trim63Q38HM4 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trim63Q38HM4 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC11.95□□□□□ -0.5
Trim63Q38HM4 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Trim63Q38HM4 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Trim63Q38HM4 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trim63Q38HM4 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trim63Q38HM4 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trim63Q38HM4 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Trim63Q38HM4 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trim63Q38HM4 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trim63Q38HM4 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trim63Q38HM4 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC11.95□□□□□ -0.5
Trim63Q38HM4 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trim63Q38HM4 Gm6257-201ENSMUST00000163864 910 ntBASIC11.95□□□□□ -0.5
Trim63Q38HM4 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC11.95□□□□□ -0.5
Trim63Q38HM4 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC11.95□□□□□ -0.5
Trim63Q38HM4 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC11.95□□□□□ -0.5
Trim63Q38HM4 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trim63Q38HM4 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC11.95□□□□□ -0.5
Trim63Q38HM4 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trim63Q38HM4 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trim63Q38HM4 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trim63Q38HM4 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trim63Q38HM4 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Trim63Q38HM4 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trim63Q38HM4 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trim63Q38HM4 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trim63Q38HM4 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Trim63Q38HM4 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC11.95□□□□□ -0.5
Trim63Q38HM4 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trim63Q38HM4 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trim63Q38HM4 Gm6858-201ENSMUST00000208582 1468 ntBASIC11.95□□□□□ -0.5
Trim63Q38HM4 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trim63Q38HM4 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trim63Q38HM4 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trim63Q38HM4 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms