Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 AC127270.1-201ENSMUST00000221441 491 ntTSL 3 BASIC12.86□□□□□ -0.35
Chd8Q09XV5 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Chd8Q09XV5 Gm5879-201ENSMUST00000089501 1209 ntBASIC12.86□□□□□ -0.35
Chd8Q09XV5 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Chd8Q09XV5 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC12.86□□□□□ -0.35
Chd8Q09XV5 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Chd8Q09XV5 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Chd8Q09XV5 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Chd8Q09XV5 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Chd8Q09XV5 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC12.86□□□□□ -0.35
Chd8Q09XV5 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Chd8Q09XV5 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Chd8Q09XV5 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Chd8Q09XV5 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Chd8Q09XV5 Gm13689-201ENSMUST00000119360 685 ntBASIC12.86□□□□□ -0.35
Chd8Q09XV5 Gm15376-201ENSMUST00000122258 783 ntBASIC12.86□□□□□ -0.35
Chd8Q09XV5 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC12.86□□□□□ -0.35
Chd8Q09XV5 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC12.86□□□□□ -0.35
Chd8Q09XV5 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC12.86□□□□□ -0.35
Chd8Q09XV5 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Chd8Q09XV5 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Chd8Q09XV5 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Chd8Q09XV5 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Chd8Q09XV5 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Chd8Q09XV5 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Chd8Q09XV5 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC12.86□□□□□ -0.35
Chd8Q09XV5 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Chd8Q09XV5 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Chd8Q09XV5 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Chd8Q09XV5 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC12.86□□□□□ -0.35
Chd8Q09XV5 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Chd8Q09XV5 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC12.85□□□□□ -0.35
Chd8Q09XV5 Gm6152-201ENSMUST00000151704 340 ntBASIC12.85□□□□□ -0.35
Chd8Q09XV5 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC12.85□□□□□ -0.35
Chd8Q09XV5 Gm28450-201ENSMUST00000187349 638 ntBASIC12.85□□□□□ -0.35
Chd8Q09XV5 Gm6916-202ENSMUST00000205523 195 ntBASIC12.85□□□□□ -0.35
Chd8Q09XV5 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC12.85□□□□□ -0.35
Chd8Q09XV5 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC12.85□□□□□ -0.35
Chd8Q09XV5 Cmtm2a-201ENSMUST00000034344 1081 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Chd8Q09XV5 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Chd8Q09XV5 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Chd8Q09XV5 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Chd8Q09XV5 Gm38391-201ENSMUST00000191720 4069 ntBASIC12.85□□□□□ -0.35
Chd8Q09XV5 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Chd8Q09XV5 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Chd8Q09XV5 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC12.85□□□□□ -0.35
Chd8Q09XV5 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC12.85□□□□□ -0.35
Chd8Q09XV5 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Chd8Q09XV5 Gm14726-201ENSMUST00000120623 896 ntBASIC12.85□□□□□ -0.35
Chd8Q09XV5 Gm11815-201ENSMUST00000139423 708 ntTSL 5 BASIC12.85□□□□□ -0.35
Chd8Q09XV5 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC12.85□□□□□ -0.35
Chd8Q09XV5 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Chd8Q09XV5 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Chd8Q09XV5 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC12.85□□□□□ -0.35
Chd8Q09XV5 AC126253.1-202ENSMUST00000226732 835 ntBASIC12.85□□□□□ -0.35
Chd8Q09XV5 Prm3-201ENSMUST00000050864 410 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Chd8Q09XV5 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Chd8Q09XV5 Gm4950-201ENSMUST00000091905 618 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Chd8Q09XV5 Gm5884-201ENSMUST00000036712 1479 ntBASIC12.85□□□□□ -0.35
Chd8Q09XV5 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Chd8Q09XV5 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Chd8Q09XV5 Gm21038-201ENSMUST00000222205 1383 ntBASIC12.85□□□□□ -0.35
Chd8Q09XV5 Gm15371-201ENSMUST00000117057 784 ntBASIC12.84□□□□□ -0.35
Chd8Q09XV5 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC12.84□□□□□ -0.35
Chd8Q09XV5 Gm11211-201ENSMUST00000143618 359 ntTSL 3 BASIC12.84□□□□□ -0.35
Chd8Q09XV5 Gm7498-201ENSMUST00000203282 1084 ntBASIC12.84□□□□□ -0.35
Chd8Q09XV5 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Chd8Q09XV5 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Chd8Q09XV5 AC159103.1-201ENSMUST00000228325 429 ntBASIC12.84□□□□□ -0.35
Chd8Q09XV5 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Chd8Q09XV5 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Chd8Q09XV5 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC12.84□□□□□ -0.35
Chd8Q09XV5 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Chd8Q09XV5 Rgs6-207ENSMUST00000186323 1308 ntTSL 5 BASIC12.84□□□□□ -0.35
Chd8Q09XV5 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Chd8Q09XV5 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Chd8Q09XV5 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Chd8Q09XV5 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Chd8Q09XV5 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC12.84□□□□□ -0.35
Chd8Q09XV5 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Chd8Q09XV5 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC12.84□□□□□ -0.35
Chd8Q09XV5 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC12.84□□□□□ -0.35
Chd8Q09XV5 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC12.84□□□□□ -0.35
Chd8Q09XV5 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Chd8Q09XV5 Plp2-201ENSMUST00000033486 1157 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Chd8Q09XV5 Olfr76-201ENSMUST00000087822 1048 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Chd8Q09XV5 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Chd8Q09XV5 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Chd8Q09XV5 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC12.84□□□□□ -0.35
Chd8Q09XV5 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Chd8Q09XV5 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Chd8Q09XV5 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.35
Chd8Q09XV5 Gm16342-201ENSMUST00000124025 1025 ntBASIC12.83□□□□□ -0.35
Chd8Q09XV5 Gm16379-201ENSMUST00000161469 348 ntBASIC12.83□□□□□ -0.35
Chd8Q09XV5 Gm8762-201ENSMUST00000193486 339 ntBASIC12.83□□□□□ -0.35
Chd8Q09XV5 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Chd8Q09XV5 AC153366.2-201ENSMUST00000219461 1984 ntBASIC12.83□□□□□ -0.35
Chd8Q09XV5 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC12.83□□□□□ -0.36
Chd8Q09XV5 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Chd8Q09XV5 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 55 ms