Protein–RNA interactions for Protein: P97952

Scn1b, Sodium channel subunit beta-1, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1bP97952 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC13.28□□□□□ -0.28
Scn1bP97952 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Scn1bP97952 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Scn1bP97952 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
Scn1bP97952 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Scn1bP97952 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Scn1bP97952 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC13.28□□□□□ -0.28
Scn1bP97952 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
Scn1bP97952 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Scn1bP97952 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Scn1bP97952 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Scn1bP97952 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Scn1bP97952 Gm10313-201ENSMUST00000095320 1002 ntBASIC13.28□□□□□ -0.28
Scn1bP97952 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Scn1bP97952 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Scn1bP97952 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Scn1bP97952 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Scn1bP97952 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Scn1bP97952 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
Scn1bP97952 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Scn1bP97952 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Scn1bP97952 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Scn1bP97952 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Scn1bP97952 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Scn1bP97952 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Scn1bP97952 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC13.28□□□□□ -0.28
Scn1bP97952 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Scn1bP97952 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Scn1bP97952 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Scn1bP97952 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Scn1bP97952 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Scn1bP97952 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Scn1bP97952 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Scn1bP97952 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Scn1bP97952 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Scn1bP97952 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Scn1bP97952 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Scn1bP97952 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Scn1bP97952 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC13.27□□□□□ -0.29
Scn1bP97952 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Scn1bP97952 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Scn1bP97952 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Scn1bP97952 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC13.27□□□□□ -0.29
Scn1bP97952 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Scn1bP97952 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC13.27□□□□□ -0.29
Scn1bP97952 Gm7286-201ENSMUST00000182691 1007 ntBASIC13.27□□□□□ -0.29
Scn1bP97952 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC13.27□□□□□ -0.29
Scn1bP97952 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC13.27□□□□□ -0.29
Scn1bP97952 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Scn1bP97952 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Scn1bP97952 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Scn1bP97952 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Scn1bP97952 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Scn1bP97952 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC13.27□□□□□ -0.29
Scn1bP97952 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Scn1bP97952 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Scn1bP97952 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Scn1bP97952 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Scn1bP97952 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Scn1bP97952 AC126250.1-201ENSMUST00000228343 1768 ntBASIC13.27□□□□□ -0.29
Scn1bP97952 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Scn1bP97952 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC13.27□□□□□ -0.29
Scn1bP97952 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Scn1bP97952 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Scn1bP97952 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Scn1bP97952 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC13.26□□□□□ -0.29
Scn1bP97952 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Scn1bP97952 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Scn1bP97952 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Scn1bP97952 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Scn1bP97952 Gm15794-201ENSMUST00000120182 631 ntBASIC13.26□□□□□ -0.29
Scn1bP97952 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC13.26□□□□□ -0.29
Scn1bP97952 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Scn1bP97952 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC13.26□□□□□ -0.29
Scn1bP97952 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Scn1bP97952 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Scn1bP97952 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC13.26□□□□□ -0.29
Scn1bP97952 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Scn1bP97952 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Scn1bP97952 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Scn1bP97952 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Scn1bP97952 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Scn1bP97952 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Scn1bP97952 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Scn1bP97952 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Scn1bP97952 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Scn1bP97952 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Scn1bP97952 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Scn1bP97952 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC13.25□□□□□ -0.29
Scn1bP97952 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Scn1bP97952 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC13.25□□□□□ -0.29
Scn1bP97952 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Scn1bP97952 Gm44065-201ENSMUST00000203184 3527 ntBASIC13.25□□□□□ -0.29
Scn1bP97952 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Scn1bP97952 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Scn1bP97952 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Scn1bP97952 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC13.25□□□□□ -0.29
Scn1bP97952 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Scn1bP97952 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Scn1bP97952 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC13.25□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms