Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 Gm9182-201ENSMUST00000217829 639 ntBASIC12.53□□□□□ -0.4
Nkx3-1P97436 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Nkx3-1P97436 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC12.53□□□□□ -0.4
Nkx3-1P97436 Gm6263-201ENSMUST00000120029 1342 ntBASIC12.53□□□□□ -0.4
Nkx3-1P97436 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC12.53□□□□□ -0.4
Nkx3-1P97436 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Nkx3-1P97436 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Nkx3-1P97436 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nkx3-1P97436 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nkx3-1P97436 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nkx3-1P97436 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nkx3-1P97436 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nkx3-1P97436 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Nkx3-1P97436 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC12.53□□□□□ -0.4
Nkx3-1P97436 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Nkx3-1P97436 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC12.53□□□□□ -0.4
Nkx3-1P97436 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Nkx3-1P97436 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Nkx3-1P97436 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Nkx3-1P97436 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Nkx3-1P97436 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Nkx3-1P97436 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Nkx3-1P97436 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Nkx3-1P97436 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Nkx3-1P97436 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC12.52□□□□□ -0.41
Nkx3-1P97436 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nkx3-1P97436 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nkx3-1P97436 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nkx3-1P97436 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nkx3-1P97436 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nkx3-1P97436 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Nkx3-1P97436 Gm9794-201ENSMUST00000202370 423 ntBASIC12.52□□□□□ -0.41
Nkx3-1P97436 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC12.52□□□□□ -0.41
Nkx3-1P97436 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nkx3-1P97436 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Nkx3-1P97436 Gm20445-201ENSMUST00000061905 565 ntBASIC12.52□□□□□ -0.41
Nkx3-1P97436 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nkx3-1P97436 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nkx3-1P97436 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nkx3-1P97436 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Nkx3-1P97436 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC12.52□□□□□ -0.41
Nkx3-1P97436 Gm45212-201ENSMUST00000205831 3403 ntBASIC12.52□□□□□ -0.41
Nkx3-1P97436 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nkx3-1P97436 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nkx3-1P97436 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nkx3-1P97436 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nkx3-1P97436 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nkx3-1P97436 Tfap2a-203ENSMUST00000223869 2037 ntBASIC12.52□□□□□ -0.41
Nkx3-1P97436 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nkx3-1P97436 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nkx3-1P97436 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nkx3-1P97436 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nkx3-1P97436 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nkx3-1P97436 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nkx3-1P97436 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC12.51□□□□□ -0.41
Nkx3-1P97436 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Nkx3-1P97436 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Nkx3-1P97436 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nkx3-1P97436 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nkx3-1P97436 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Nkx3-1P97436 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nkx3-1P97436 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
Nkx3-1P97436 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nkx3-1P97436 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC12.51□□□□□ -0.41
Nkx3-1P97436 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Nkx3-1P97436 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nkx3-1P97436 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nkx3-1P97436 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nkx3-1P97436 Gm14928-201ENSMUST00000120198 477 ntBASIC12.51□□□□□ -0.41
Nkx3-1P97436 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC12.51□□□□□ -0.41
Nkx3-1P97436 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC12.51□□□□□ -0.41
Nkx3-1P97436 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Nkx3-1P97436 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Nkx3-1P97436 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nkx3-1P97436 Gm3436-201ENSMUST00000179930 840 ntBASIC12.51□□□□□ -0.41
Nkx3-1P97436 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC12.51□□□□□ -0.41
Nkx3-1P97436 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC12.51□□□□□ -0.41
Nkx3-1P97436 AL593843.1-201ENSMUST00000195891 145 ntBASIC12.51□□□□□ -0.41
Nkx3-1P97436 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Nkx3-1P97436 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC12.51□□□□□ -0.41
Nkx3-1P97436 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Nkx3-1P97436 Gm45453-201ENSMUST00000211758 853 ntBASIC12.51□□□□□ -0.41
Nkx3-1P97436 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC12.51□□□□□ -0.41
Nkx3-1P97436 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nkx3-1P97436 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nkx3-1P97436 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Nkx3-1P97436 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nkx3-1P97436 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nkx3-1P97436 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nkx3-1P97436 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nkx3-1P97436 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Nkx3-1P97436 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
Nkx3-1P97436 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nkx3-1P97436 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nkx3-1P97436 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Nkx3-1P97436 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nkx3-1P97436 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC12.51□□□□□ -0.41
Nkx3-1P97436 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nkx3-1P97436 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nkx3-1P97436 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms