Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Gm18737-201ENSMUST00000173594 937 ntBASIC15.78■□□□□ 0.12
Trim43cP86449 Gm24513-201ENSMUST00000174964 138 ntBASIC15.78■□□□□ 0.12
Trim43cP86449 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC15.78■□□□□ 0.12
Trim43cP86449 Gm29541-201ENSMUST00000191351 678 ntBASIC15.78■□□□□ 0.12
Trim43cP86449 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC15.78■□□□□ 0.12
Trim43cP86449 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC15.78■□□□□ 0.12
Trim43cP86449 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trim43cP86449 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC15.78■□□□□ 0.12
Trim43cP86449 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Trim43cP86449 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trim43cP86449 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trim43cP86449 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trim43cP86449 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trim43cP86449 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trim43cP86449 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trim43cP86449 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trim43cP86449 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trim43cP86449 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trim43cP86449 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trim43cP86449 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trim43cP86449 Gm6756-201ENSMUST00000180647 1620 ntBASIC15.78■□□□□ 0.12
Trim43cP86449 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trim43cP86449 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC15.78■□□□□ 0.12
Trim43cP86449 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC15.78■□□□□ 0.12
Trim43cP86449 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC15.78■□□□□ 0.12
Trim43cP86449 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trim43cP86449 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Trim43cP86449 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trim43cP86449 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trim43cP86449 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trim43cP86449 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trim43cP86449 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trim43cP86449 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
Trim43cP86449 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trim43cP86449 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC15.77■□□□□ 0.12
Trim43cP86449 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trim43cP86449 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trim43cP86449 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trim43cP86449 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Trim43cP86449 AC167013.2-201ENSMUST00000228520 2684 ntBASIC15.77■□□□□ 0.12
Trim43cP86449 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC15.77■□□□□ 0.12
Trim43cP86449 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Trim43cP86449 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trim43cP86449 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trim43cP86449 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Trim43cP86449 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trim43cP86449 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Trim43cP86449 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC15.77■□□□□ 0.12
Trim43cP86449 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Trim43cP86449 Gm44335-201ENSMUST00000196879 141 ntBASIC15.77■□□□□ 0.12
Trim43cP86449 Gm44297-201ENSMUST00000198304 141 ntBASIC15.77■□□□□ 0.12
Trim43cP86449 AC151286.1-201ENSMUST00000198489 145 ntBASIC15.77■□□□□ 0.12
Trim43cP86449 Gm44346-201ENSMUST00000198851 141 ntBASIC15.77■□□□□ 0.12
Trim43cP86449 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC15.77■□□□□ 0.12
Trim43cP86449 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Trim43cP86449 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Trim43cP86449 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trim43cP86449 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Trim43cP86449 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
Trim43cP86449 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Trim43cP86449 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trim43cP86449 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trim43cP86449 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trim43cP86449 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trim43cP86449 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Trim43cP86449 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trim43cP86449 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC15.76■□□□□ 0.11
Trim43cP86449 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trim43cP86449 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC15.76■□□□□ 0.11
Trim43cP86449 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
Trim43cP86449 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trim43cP86449 Ssr1-204ENSMUST00000225319 1610 ntBASIC15.76■□□□□ 0.11
Trim43cP86449 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trim43cP86449 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trim43cP86449 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trim43cP86449 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trim43cP86449 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trim43cP86449 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trim43cP86449 Gm14822-201ENSMUST00000122247 291 ntBASIC15.76■□□□□ 0.11
Trim43cP86449 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
Trim43cP86449 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC15.76■□□□□ 0.11
Trim43cP86449 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trim43cP86449 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trim43cP86449 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trim43cP86449 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trim43cP86449 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC15.76■□□□□ 0.11
Trim43cP86449 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trim43cP86449 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trim43cP86449 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trim43cP86449 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trim43cP86449 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Trim43cP86449 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trim43cP86449 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC15.76■□□□□ 0.11
Trim43cP86449 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC15.76■□□□□ 0.11
Trim43cP86449 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Trim43cP86449 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Trim43cP86449 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trim43cP86449 Sorbs3-204ENSMUST00000227929 2460 ntBASIC15.75■□□□□ 0.11
Trim43cP86449 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trim43cP86449 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms