Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Pdlim4P70271 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Pdlim4P70271 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pdlim4P70271 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pdlim4P70271 Nrn1-204ENSMUST00000224323 1779 ntBASIC12.1□□□□□ -0.47
Pdlim4P70271 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pdlim4P70271 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC12.1□□□□□ -0.47
Pdlim4P70271 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pdlim4P70271 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pdlim4P70271 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pdlim4P70271 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Pdlim4P70271 Gm5648-201ENSMUST00000122244 1587 ntBASIC12.09□□□□□ -0.47
Pdlim4P70271 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Pdlim4P70271 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pdlim4P70271 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pdlim4P70271 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pdlim4P70271 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Pdlim4P70271 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Pdlim4P70271 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Pdlim4P70271 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Pdlim4P70271 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pdlim4P70271 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC12.09□□□□□ -0.47
Pdlim4P70271 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pdlim4P70271 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pdlim4P70271 Rpph1-201ENSMUST00000175096 319 ntBASIC12.09□□□□□ -0.47
Pdlim4P70271 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC12.09□□□□□ -0.47
Pdlim4P70271 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC12.09□□□□□ -0.47
Pdlim4P70271 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC12.09□□□□□ -0.47
Pdlim4P70271 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pdlim4P70271 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Pdlim4P70271 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pdlim4P70271 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pdlim4P70271 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Pdlim4P70271 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC12.09□□□□□ -0.47
Pdlim4P70271 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC12.09□□□□□ -0.47
Pdlim4P70271 AC126250.1-201ENSMUST00000228343 1768 ntBASIC12.09□□□□□ -0.47
Pdlim4P70271 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pdlim4P70271 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pdlim4P70271 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.47
Pdlim4P70271 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Pdlim4P70271 Gm13233-201ENSMUST00000118760 1443 ntBASIC12.09□□□□□ -0.47
Pdlim4P70271 Gm13244-201ENSMUST00000118855 1446 ntBASIC12.09□□□□□ -0.47
Pdlim4P70271 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pdlim4P70271 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pdlim4P70271 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC12.09□□□□□ -0.47
Pdlim4P70271 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC12.09□□□□□ -0.47
Pdlim4P70271 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pdlim4P70271 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pdlim4P70271 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.47
Pdlim4P70271 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC12.08□□□□□ -0.47
Pdlim4P70271 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.47
Pdlim4P70271 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Pdlim4P70271 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC12.08□□□□□ -0.48
Pdlim4P70271 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
Pdlim4P70271 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Pdlim4P70271 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Pdlim4P70271 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Pdlim4P70271 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pdlim4P70271 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC12.08□□□□□ -0.48
Pdlim4P70271 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pdlim4P70271 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pdlim4P70271 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC12.08□□□□□ -0.48
Pdlim4P70271 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pdlim4P70271 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pdlim4P70271 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pdlim4P70271 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Pdlim4P70271 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC12.08□□□□□ -0.48
Pdlim4P70271 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC12.08□□□□□ -0.48
Pdlim4P70271 Gm27702-201ENSMUST00000184512 56 ntBASIC12.08□□□□□ -0.48
Pdlim4P70271 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC12.08□□□□□ -0.48
Pdlim4P70271 Gpr146-202ENSMUST00000053120 1040 ntBASIC12.08□□□□□ -0.48
Pdlim4P70271 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Pdlim4P70271 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pdlim4P70271 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pdlim4P70271 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pdlim4P70271 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pdlim4P70271 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pdlim4P70271 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pdlim4P70271 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Pdlim4P70271 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pdlim4P70271 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pdlim4P70271 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pdlim4P70271 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pdlim4P70271 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pdlim4P70271 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pdlim4P70271 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pdlim4P70271 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Pdlim4P70271 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pdlim4P70271 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pdlim4P70271 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pdlim4P70271 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pdlim4P70271 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pdlim4P70271 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pdlim4P70271 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pdlim4P70271 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pdlim4P70271 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pdlim4P70271 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Pdlim4P70271 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pdlim4P70271 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Pdlim4P70271 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 57.6 ms