Protein–RNA interactions for Protein: P70178

Six5, Homeobox protein SIX5, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six5P70178 Gm27397-201ENSMUST00000184997 107 ntBASIC13.59□□□□□ -0.23
Six5P70178 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC13.59□□□□□ -0.23
Six5P70178 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC13.59□□□□□ -0.23
Six5P70178 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC13.59□□□□□ -0.23
Six5P70178 AC166341.4-201ENSMUST00000220625 123 ntBASIC13.59□□□□□ -0.23
Six5P70178 AC155252.2-201ENSMUST00000226946 680 ntBASIC13.59□□□□□ -0.23
Six5P70178 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Six5P70178 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Six5P70178 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC13.59□□□□□ -0.23
Six5P70178 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Six5P70178 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Six5P70178 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Six5P70178 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Six5P70178 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Six5P70178 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Six5P70178 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Six5P70178 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Six5P70178 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Six5P70178 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Six5P70178 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC13.58□□□□□ -0.23
Six5P70178 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Six5P70178 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Six5P70178 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC13.58□□□□□ -0.23
Six5P70178 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Six5P70178 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Six5P70178 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Six5P70178 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC13.58□□□□□ -0.24
Six5P70178 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC13.58□□□□□ -0.24
Six5P70178 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC13.58□□□□□ -0.24
Six5P70178 Gm11594-201ENSMUST00000122313 162 ntBASIC13.58□□□□□ -0.24
Six5P70178 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC13.58□□□□□ -0.24
Six5P70178 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Six5P70178 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC13.58□□□□□ -0.24
Six5P70178 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC13.58□□□□□ -0.24
Six5P70178 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Six5P70178 AC131187.1-201ENSMUST00000224567 809 ntBASIC13.58□□□□□ -0.24
Six5P70178 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Six5P70178 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC13.58□□□□□ -0.24
Six5P70178 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC13.58□□□□□ -0.24
Six5P70178 Gm44645-201ENSMUST00000205492 1653 ntBASIC13.58□□□□□ -0.24
Six5P70178 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Six5P70178 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Six5P70178 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Six5P70178 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Six5P70178 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Six5P70178 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Six5P70178 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Six5P70178 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Six5P70178 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Six5P70178 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Six5P70178 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Six5P70178 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Six5P70178 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC13.58□□□□□ -0.24
Six5P70178 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Six5P70178 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Six5P70178 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC13.58□□□□□ -0.24
Six5P70178 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Six5P70178 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Six5P70178 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Six5P70178 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Six5P70178 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Six5P70178 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC13.57□□□□□ -0.24
Six5P70178 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
Six5P70178 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Six5P70178 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Six5P70178 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Six5P70178 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Six5P70178 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Six5P70178 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Six5P70178 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Six5P70178 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Six5P70178 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Six5P70178 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Six5P70178 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Six5P70178 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Six5P70178 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC13.57□□□□□ -0.24
Six5P70178 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Six5P70178 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC13.57□□□□□ -0.24
Six5P70178 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC13.57□□□□□ -0.24
Six5P70178 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Six5P70178 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Six5P70178 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Six5P70178 Gm12620-201ENSMUST00000119791 1986 ntBASIC13.57□□□□□ -0.24
Six5P70178 Gm12612-201ENSMUST00000140182 1986 ntBASIC13.57□□□□□ -0.24
Six5P70178 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Six5P70178 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Six5P70178 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Six5P70178 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC13.57□□□□□ -0.24
Six5P70178 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Six5P70178 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Six5P70178 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Six5P70178 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Six5P70178 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Six5P70178 Gm13332-201ENSMUST00000120451 1398 ntBASIC13.57□□□□□ -0.24
Six5P70178 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Six5P70178 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Six5P70178 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Six5P70178 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Six5P70178 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Six5P70178 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms