Protein–RNA interactions for Protein: P62962

Pfn1, Profilin-1, mousemouse

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfn1P62962 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pfn1P62962 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pfn1P62962 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pfn1P62962 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pfn1P62962 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Pfn1P62962 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Pfn1P62962 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pfn1P62962 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pfn1P62962 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pfn1P62962 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Pfn1P62962 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pfn1P62962 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pfn1P62962 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pfn1P62962 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Pfn1P62962 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pfn1P62962 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Pfn1P62962 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pfn1P62962 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Pfn1P62962 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pfn1P62962 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pfn1P62962 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Pfn1P62962 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC11.28□□□□□ -0.6
Pfn1P62962 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Pfn1P62962 Gm25016-201ENSMUST00000158399 131 ntBASIC11.28□□□□□ -0.6
Pfn1P62962 Gm44454-201ENSMUST00000198541 138 ntBASIC11.28□□□□□ -0.6
Pfn1P62962 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC11.28□□□□□ -0.6
Pfn1P62962 AC117588.1-201ENSMUST00000228510 999 ntBASIC11.28□□□□□ -0.6
Pfn1P62962 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pfn1P62962 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Pfn1P62962 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pfn1P62962 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pfn1P62962 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pfn1P62962 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC11.28□□□□□ -0.6
Pfn1P62962 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Pfn1P62962 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pfn1P62962 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC11.28□□□□□ -0.6
Pfn1P62962 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Pfn1P62962 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Pfn1P62962 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC11.28□□□□□ -0.6
Pfn1P62962 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pfn1P62962 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pfn1P62962 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Pfn1P62962 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Pfn1P62962 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Pfn1P62962 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pfn1P62962 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Pfn1P62962 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Pfn1P62962 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Pfn1P62962 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Pfn1P62962 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Pfn1P62962 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Pfn1P62962 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Pfn1P62962 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Pfn1P62962 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC11.27□□□□□ -0.6
Pfn1P62962 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Pfn1P62962 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Pfn1P62962 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Pfn1P62962 Gm8344-201ENSMUST00000119813 856 ntBASIC11.27□□□□□ -0.61
Pfn1P62962 Gm15794-201ENSMUST00000120182 631 ntBASIC11.27□□□□□ -0.61
Pfn1P62962 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC11.27□□□□□ -0.61
Pfn1P62962 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Pfn1P62962 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Pfn1P62962 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Pfn1P62962 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC11.27□□□□□ -0.61
Pfn1P62962 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC11.27□□□□□ -0.61
Pfn1P62962 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Pfn1P62962 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Pfn1P62962 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Pfn1P62962 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Pfn1P62962 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Pfn1P62962 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Pfn1P62962 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Pfn1P62962 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Pfn1P62962 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Pfn1P62962 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Pfn1P62962 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Pfn1P62962 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Pfn1P62962 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Pfn1P62962 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Pfn1P62962 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Pfn1P62962 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Pfn1P62962 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Pfn1P62962 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Pfn1P62962 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Pfn1P62962 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Pfn1P62962 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Pfn1P62962 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Pfn1P62962 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Pfn1P62962 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Pfn1P62962 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Pfn1P62962 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Pfn1P62962 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Pfn1P62962 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Pfn1P62962 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Pfn1P62962 Gm14371-201ENSMUST00000138925 1518 ntBASIC11.26□□□□□ -0.61
Pfn1P62962 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Pfn1P62962 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Pfn1P62962 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Pfn1P62962 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Pfn1P62962 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 53.9 ms