Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ybx1P62960 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ybx1P62960 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ybx1P62960 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Ybx1P62960 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ybx1P62960 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ybx1P62960 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Ybx1P62960 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ybx1P62960 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ybx1P62960 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ybx1P62960 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ybx1P62960 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC14.84□□□□□ -0.03
Ybx1P62960 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Ybx1P62960 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ybx1P62960 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Ybx1P62960 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC14.84□□□□□ -0.03
Ybx1P62960 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ybx1P62960 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ybx1P62960 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ybx1P62960 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ybx1P62960 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ybx1P62960 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ybx1P62960 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Ybx1P62960 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC14.84□□□□□ -0.03
Ybx1P62960 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Ybx1P62960 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC14.84□□□□□ -0.03
Ybx1P62960 Gm18187-201ENSMUST00000196476 984 ntBASIC14.84□□□□□ -0.03
Ybx1P62960 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC14.84□□□□□ -0.03
Ybx1P62960 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Ybx1P62960 Gm9908-201ENSMUST00000211534 448 ntBASIC14.84□□□□□ -0.03
Ybx1P62960 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC14.84□□□□□ -0.03
Ybx1P62960 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Ybx1P62960 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ybx1P62960 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ybx1P62960 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ybx1P62960 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ybx1P62960 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Ybx1P62960 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ybx1P62960 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Ybx1P62960 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ybx1P62960 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ybx1P62960 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Ybx1P62960 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Ybx1P62960 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ybx1P62960 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ybx1P62960 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ybx1P62960 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
Ybx1P62960 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.03
Ybx1P62960 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Ybx1P62960 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Ybx1P62960 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC14.83□□□□□ -0.03
Ybx1P62960 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ybx1P62960 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Ybx1P62960 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Ybx1P62960 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ybx1P62960 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
Ybx1P62960 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Ybx1P62960 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC14.83□□□□□ -0.04
Ybx1P62960 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC14.83□□□□□ -0.04
Ybx1P62960 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC14.83□□□□□ -0.04
Ybx1P62960 Gm10766-202ENSMUST00000194123 606 ntBASIC14.83□□□□□ -0.04
Ybx1P62960 Gm8515-201ENSMUST00000194852 576 ntBASIC14.83□□□□□ -0.04
Ybx1P62960 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ybx1P62960 Gm9229-201ENSMUST00000222777 126 ntBASIC14.83□□□□□ -0.04
Ybx1P62960 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ybx1P62960 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ybx1P62960 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Ybx1P62960 Mir125a-201ENSMUST00000083545 68 ntBASIC14.83□□□□□ -0.04
Ybx1P62960 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ybx1P62960 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Ybx1P62960 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.04
Ybx1P62960 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ybx1P62960 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ybx1P62960 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ybx1P62960 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ybx1P62960 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC14.83□□□□□ -0.04
Ybx1P62960 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ybx1P62960 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC14.83□□□□□ -0.04
Ybx1P62960 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Ybx1P62960 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ybx1P62960 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ybx1P62960 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ybx1P62960 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Ybx1P62960 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Ybx1P62960 Gm21009-201ENSMUST00000197169 1669 ntBASIC14.82□□□□□ -0.04
Ybx1P62960 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
Ybx1P62960 Gm12091-201ENSMUST00000146791 830 ntBASIC14.82□□□□□ -0.04
Ybx1P62960 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC14.82□□□□□ -0.04
Ybx1P62960 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Ybx1P62960 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Ybx1P62960 Gm9726-201ENSMUST00000180321 678 ntBASIC14.82□□□□□ -0.04
Ybx1P62960 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC14.82□□□□□ -0.04
Ybx1P62960 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ybx1P62960 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ybx1P62960 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ybx1P62960 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC14.82□□□□□ -0.04
Ybx1P62960 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Ybx1P62960 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Ybx1P62960 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Ybx1P62960 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 52.9 ms