Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Lsm3P62311 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Lsm3P62311 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Lsm3P62311 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Lsm3P62311 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC13.24□□□□□ -0.29
Lsm3P62311 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC13.24□□□□□ -0.29
Lsm3P62311 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC13.24□□□□□ -0.29
Lsm3P62311 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Lsm3P62311 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Lsm3P62311 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Lsm3P62311 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Lsm3P62311 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Lsm3P62311 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Lsm3P62311 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Lsm3P62311 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC13.24□□□□□ -0.29
Lsm3P62311 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC13.24□□□□□ -0.29
Lsm3P62311 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC13.24□□□□□ -0.29
Lsm3P62311 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Lsm3P62311 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Lsm3P62311 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Lsm3P62311 Gm37644-201ENSMUST00000192190 2270 ntBASIC13.24□□□□□ -0.29
Lsm3P62311 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Lsm3P62311 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC13.24□□□□□ -0.29
Lsm3P62311 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC13.24□□□□□ -0.29
Lsm3P62311 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Lsm3P62311 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC13.24□□□□□ -0.29
Lsm3P62311 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
Lsm3P62311 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Lsm3P62311 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Lsm3P62311 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Lsm3P62311 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Lsm3P62311 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Lsm3P62311 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Lsm3P62311 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
Lsm3P62311 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Lsm3P62311 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC13.23□□□□□ -0.29
Lsm3P62311 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Lsm3P62311 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC13.23□□□□□ -0.29
Lsm3P62311 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Lsm3P62311 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Lsm3P62311 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Lsm3P62311 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Lsm3P62311 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Lsm3P62311 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC13.23□□□□□ -0.29
Lsm3P62311 Gm27389-201ENSMUST00000183622 195 ntBASIC13.23□□□□□ -0.29
Lsm3P62311 AC159205.6-201ENSMUST00000224935 887 ntBASIC13.23□□□□□ -0.29
Lsm3P62311 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Lsm3P62311 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Lsm3P62311 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Lsm3P62311 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Lsm3P62311 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC13.23□□□□□ -0.29
Lsm3P62311 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Lsm3P62311 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Lsm3P62311 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Lsm3P62311 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Lsm3P62311 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
Lsm3P62311 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Lsm3P62311 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Lsm3P62311 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Lsm3P62311 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Lsm3P62311 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Lsm3P62311 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Lsm3P62311 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Lsm3P62311 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Lsm3P62311 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Lsm3P62311 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Lsm3P62311 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Lsm3P62311 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Lsm3P62311 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Lsm3P62311 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Lsm3P62311 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Lsm3P62311 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Lsm3P62311 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Lsm3P62311 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC13.22□□□□□ -0.29
Lsm3P62311 Gm13436-201ENSMUST00000120418 567 ntBASIC13.22□□□□□ -0.29
Lsm3P62311 Gm13168-201ENSMUST00000121771 632 ntBASIC13.22□□□□□ -0.29
Lsm3P62311 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Lsm3P62311 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Lsm3P62311 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Lsm3P62311 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Lsm3P62311 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Lsm3P62311 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC13.22□□□□□ -0.29
Lsm3P62311 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Lsm3P62311 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Lsm3P62311 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Lsm3P62311 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
Lsm3P62311 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Lsm3P62311 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Lsm3P62311 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Lsm3P62311 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Lsm3P62311 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Lsm3P62311 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Lsm3P62311 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Lsm3P62311 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC13.22□□□□□ -0.29
Lsm3P62311 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Lsm3P62311 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Lsm3P62311 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC13.21□□□□□ -0.29
Lsm3P62311 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Lsm3P62311 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC13.21□□□□□ -0.29
Lsm3P62311 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms