Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC13.71□□□□□ -0.21
Nup43P59235 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nup43P59235 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Nup43P59235 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nup43P59235 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nup43P59235 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC13.71□□□□□ -0.21
Nup43P59235 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Nup43P59235 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nup43P59235 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
Nup43P59235 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
Nup43P59235 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Nup43P59235 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Nup43P59235 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Nup43P59235 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Nup43P59235 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Nup43P59235 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC13.71□□□□□ -0.22
Nup43P59235 Gm43509-201ENSMUST00000196551 2594 ntBASIC13.71□□□□□ -0.22
Nup43P59235 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
Nup43P59235 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Nup43P59235 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
Nup43P59235 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Nup43P59235 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nup43P59235 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nup43P59235 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nup43P59235 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nup43P59235 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nup43P59235 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Nup43P59235 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Nup43P59235 Gm37736-201ENSMUST00000193564 2802 ntBASIC13.7□□□□□ -0.22
Nup43P59235 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nup43P59235 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Nup43P59235 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Nup43P59235 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Nup43P59235 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC13.7□□□□□ -0.22
Nup43P59235 Gm25287-201ENSMUST00000103846 110 ntBASIC13.7□□□□□ -0.22
Nup43P59235 Gm22918-201ENSMUST00000103855 110 ntBASIC13.7□□□□□ -0.22
Nup43P59235 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
Nup43P59235 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Nup43P59235 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Nup43P59235 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC13.7□□□□□ -0.22
Nup43P59235 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC13.7□□□□□ -0.22
Nup43P59235 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Nup43P59235 Gm9252-201ENSMUST00000172364 1602 ntBASIC13.7□□□□□ -0.22
Nup43P59235 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nup43P59235 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nup43P59235 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Nup43P59235 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nup43P59235 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC13.7□□□□□ -0.22
Nup43P59235 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nup43P59235 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nup43P59235 Gm38042-201ENSMUST00000191614 5208 ntBASIC13.7□□□□□ -0.22
Nup43P59235 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Nup43P59235 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nup43P59235 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Nup43P59235 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nup43P59235 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nup43P59235 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Nup43P59235 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC13.69□□□□□ -0.22
Nup43P59235 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nup43P59235 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nup43P59235 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Nup43P59235 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nup43P59235 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nup43P59235 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Nup43P59235 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nup43P59235 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC13.69□□□□□ -0.22
Nup43P59235 Gm5312-201ENSMUST00000203728 547 ntBASIC13.69□□□□□ -0.22
Nup43P59235 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC13.69□□□□□ -0.22
Nup43P59235 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC13.69□□□□□ -0.22
Nup43P59235 AC158529.1-201ENSMUST00000223618 239 ntBASIC13.69□□□□□ -0.22
Nup43P59235 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nup43P59235 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC13.69□□□□□ -0.22
Nup43P59235 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Nup43P59235 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Nup43P59235 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nup43P59235 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nup43P59235 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Nup43P59235 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nup43P59235 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nup43P59235 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Nup43P59235 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nup43P59235 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
Nup43P59235 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Nup43P59235 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nup43P59235 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nup43P59235 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nup43P59235 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nup43P59235 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nup43P59235 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC13.68□□□□□ -0.22
Nup43P59235 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nup43P59235 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nup43P59235 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Nup43P59235 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Nup43P59235 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nup43P59235 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Nup43P59235 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Nup43P59235 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nup43P59235 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nup43P59235 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC13.68□□□□□ -0.22
Nup43P59235 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC13.68□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms