Protein–RNA interactions for Protein: P55271

Cdkn2b, Cyclin-dependent kinase 4 inhibitor B, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn2bP55271 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cdkn2bP55271 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cdkn2bP55271 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cdkn2bP55271 Gm42769-201ENSMUST00000198576 1659 ntBASIC13.91□□□□□ -0.18
Cdkn2bP55271 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC13.91□□□□□ -0.18
Cdkn2bP55271 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cdkn2bP55271 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cdkn2bP55271 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Cdkn2bP55271 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cdkn2bP55271 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Cdkn2bP55271 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cdkn2bP55271 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cdkn2bP55271 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC13.9□□□□□ -0.18
Cdkn2bP55271 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC13.9□□□□□ -0.18
Cdkn2bP55271 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cdkn2bP55271 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC13.9□□□□□ -0.18
Cdkn2bP55271 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cdkn2bP55271 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Cdkn2bP55271 Gm16026-204ENSMUST00000162652 683 ntBASIC13.9□□□□□ -0.18
Cdkn2bP55271 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC13.9□□□□□ -0.18
Cdkn2bP55271 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC13.9□□□□□ -0.18
Cdkn2bP55271 Gm10060-201ENSMUST00000212002 111 ntBASIC13.9□□□□□ -0.18
Cdkn2bP55271 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC13.9□□□□□ -0.18
Cdkn2bP55271 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cdkn2bP55271 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cdkn2bP55271 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cdkn2bP55271 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC13.9□□□□□ -0.18
Cdkn2bP55271 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Cdkn2bP55271 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cdkn2bP55271 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cdkn2bP55271 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Cdkn2bP55271 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC13.9□□□□□ -0.18
Cdkn2bP55271 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Cdkn2bP55271 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cdkn2bP55271 CT030684.3-201ENSMUST00000227308 2445 ntBASIC13.9□□□□□ -0.18
Cdkn2bP55271 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cdkn2bP55271 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cdkn2bP55271 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Cdkn2bP55271 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
Cdkn2bP55271 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cdkn2bP55271 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Cdkn2bP55271 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cdkn2bP55271 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cdkn2bP55271 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Cdkn2bP55271 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cdkn2bP55271 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cdkn2bP55271 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cdkn2bP55271 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC13.89□□□□□ -0.19
Cdkn2bP55271 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cdkn2bP55271 Gm9103-201ENSMUST00000119371 405 ntBASIC13.89□□□□□ -0.19
Cdkn2bP55271 Gm13597-201ENSMUST00000121239 375 ntBASIC13.89□□□□□ -0.19
Cdkn2bP55271 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Cdkn2bP55271 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC13.89□□□□□ -0.19
Cdkn2bP55271 Umpk-ps-201ENSMUST00000211897 827 ntBASIC13.89□□□□□ -0.19
Cdkn2bP55271 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cdkn2bP55271 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cdkn2bP55271 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cdkn2bP55271 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cdkn2bP55271 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Cdkn2bP55271 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cdkn2bP55271 Gm38102-201ENSMUST00000192791 1935 ntBASIC13.89□□□□□ -0.19
Cdkn2bP55271 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cdkn2bP55271 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cdkn2bP55271 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cdkn2bP55271 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cdkn2bP55271 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cdkn2bP55271 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cdkn2bP55271 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC13.89□□□□□ -0.19
Cdkn2bP55271 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cdkn2bP55271 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cdkn2bP55271 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cdkn2bP55271 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cdkn2bP55271 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Cdkn2bP55271 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC13.89□□□□□ -0.19
Cdkn2bP55271 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Cdkn2bP55271 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Cdkn2bP55271 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cdkn2bP55271 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC13.88□□□□□ -0.19
Cdkn2bP55271 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Cdkn2bP55271 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cdkn2bP55271 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cdkn2bP55271 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cdkn2bP55271 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cdkn2bP55271 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Cdkn2bP55271 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Cdkn2bP55271 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC13.88□□□□□ -0.19
Cdkn2bP55271 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cdkn2bP55271 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Cdkn2bP55271 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cdkn2bP55271 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC13.88□□□□□ -0.19
Cdkn2bP55271 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC13.88□□□□□ -0.19
Cdkn2bP55271 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC13.88□□□□□ -0.19
Cdkn2bP55271 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Cdkn2bP55271 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cdkn2bP55271 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC13.88□□□□□ -0.19
Cdkn2bP55271 Gm9182-201ENSMUST00000217829 639 ntBASIC13.88□□□□□ -0.19
Cdkn2bP55271 AC161829.1-201ENSMUST00000220298 281 ntBASIC13.88□□□□□ -0.19
Cdkn2bP55271 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC13.88□□□□□ -0.19
Cdkn2bP55271 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cdkn2bP55271 Gm37691-201ENSMUST00000192147 2573 ntBASIC13.88□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 57 ms