Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Atxn1P54254 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Atxn1P54254 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Atxn1P54254 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Atxn1P54254 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Atxn1P54254 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Atxn1P54254 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Atxn1P54254 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Atxn1P54254 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Atxn1P54254 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Atxn1P54254 AC174678.1-201ENSMUST00000228007 2749 ntBASIC14.4□□□□□ -0.1
Atxn1P54254 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Atxn1P54254 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Atxn1P54254 Gm22189-201ENSMUST00000103822 86 ntBASIC14.4□□□□□ -0.1
Atxn1P54254 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Atxn1P54254 Gm4875-201ENSMUST00000118257 786 ntBASIC14.4□□□□□ -0.1
Atxn1P54254 Cd63-ps-201ENSMUST00000145417 875 ntBASIC14.4□□□□□ -0.1
Atxn1P54254 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Atxn1P54254 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Atxn1P54254 AC158529.1-201ENSMUST00000223618 239 ntBASIC14.4□□□□□ -0.1
Atxn1P54254 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Atxn1P54254 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Atxn1P54254 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Atxn1P54254 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Atxn1P54254 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Atxn1P54254 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Atxn1P54254 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Atxn1P54254 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Atxn1P54254 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Atxn1P54254 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Atxn1P54254 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Atxn1P54254 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Atxn1P54254 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Atxn1P54254 Gm37736-201ENSMUST00000193564 2802 ntBASIC14.39□□□□□ -0.11
Atxn1P54254 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Atxn1P54254 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Atxn1P54254 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Atxn1P54254 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC14.39□□□□□ -0.11
Atxn1P54254 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Atxn1P54254 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Atxn1P54254 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Atxn1P54254 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Atxn1P54254 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC14.39□□□□□ -0.11
Atxn1P54254 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC14.39□□□□□ -0.11
Atxn1P54254 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC14.39□□□□□ -0.11
Atxn1P54254 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Atxn1P54254 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC14.39□□□□□ -0.11
Atxn1P54254 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
Atxn1P54254 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Atxn1P54254 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC14.39□□□□□ -0.11
Atxn1P54254 Gm45331-201ENSMUST00000209868 554 ntBASIC14.39□□□□□ -0.11
Atxn1P54254 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Atxn1P54254 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Atxn1P54254 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Atxn1P54254 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Atxn1P54254 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Atxn1P54254 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Atxn1P54254 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Atxn1P54254 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Atxn1P54254 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Atxn1P54254 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Atxn1P54254 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC14.39□□□□□ -0.11
Atxn1P54254 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Atxn1P54254 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Atxn1P54254 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Atxn1P54254 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Atxn1P54254 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Atxn1P54254 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Atxn1P54254 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Atxn1P54254 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Atxn1P54254 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Atxn1P54254 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Atxn1P54254 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Atxn1P54254 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC14.38□□□□□ -0.11
Atxn1P54254 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC14.38□□□□□ -0.11
Atxn1P54254 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Atxn1P54254 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Atxn1P54254 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Atxn1P54254 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Atxn1P54254 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
Atxn1P54254 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC14.38□□□□□ -0.11
Atxn1P54254 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Atxn1P54254 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Atxn1P54254 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Atxn1P54254 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Atxn1P54254 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC14.38□□□□□ -0.11
Atxn1P54254 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Atxn1P54254 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Atxn1P54254 Gm42466-201ENSMUST00000202099 1301 ntBASIC14.38□□□□□ -0.11
Atxn1P54254 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Atxn1P54254 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Atxn1P54254 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Atxn1P54254 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Atxn1P54254 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Atxn1P54254 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC14.38□□□□□ -0.11
Atxn1P54254 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Atxn1P54254 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Atxn1P54254 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Atxn1P54254 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Atxn1P54254 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 63.4 ms