Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sox3P53784 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Sox3P53784 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sox3P53784 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC13.93□□□□□ -0.18
Sox3P53784 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sox3P53784 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sox3P53784 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sox3P53784 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sox3P53784 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sox3P53784 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sox3P53784 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sox3P53784 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Sox3P53784 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sox3P53784 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sox3P53784 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Sox3P53784 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Sox3P53784 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sox3P53784 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sox3P53784 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sox3P53784 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sox3P53784 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sox3P53784 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Sox3P53784 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sox3P53784 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC13.92□□□□□ -0.18
Sox3P53784 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC13.92□□□□□ -0.18
Sox3P53784 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC13.92□□□□□ -0.18
Sox3P53784 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC13.92□□□□□ -0.18
Sox3P53784 CT030684.1-201ENSMUST00000227292 914 ntBASIC13.92□□□□□ -0.18
Sox3P53784 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sox3P53784 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sox3P53784 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC13.92□□□□□ -0.18
Sox3P53784 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Sox3P53784 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sox3P53784 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC13.92□□□□□ -0.18
Sox3P53784 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sox3P53784 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Sox3P53784 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sox3P53784 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sox3P53784 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC13.92□□□□□ -0.18
Sox3P53784 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sox3P53784 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sox3P53784 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sox3P53784 Syt7-205ENSMUST00000224135 1557 ntBASIC13.92□□□□□ -0.18
Sox3P53784 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Sox3P53784 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sox3P53784 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sox3P53784 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sox3P53784 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Sox3P53784 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Sox3P53784 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sox3P53784 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sox3P53784 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sox3P53784 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC13.91□□□□□ -0.18
Sox3P53784 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sox3P53784 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC13.91□□□□□ -0.18
Sox3P53784 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sox3P53784 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sox3P53784 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sox3P53784 Gm7669-201ENSMUST00000210184 1603 ntBASIC13.91□□□□□ -0.18
Sox3P53784 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sox3P53784 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sox3P53784 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Sox3P53784 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Sox3P53784 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sox3P53784 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sox3P53784 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sox3P53784 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
Sox3P53784 Gm6912-201ENSMUST00000117218 544 ntBASIC13.91□□□□□ -0.18
Sox3P53784 Gm12134-201ENSMUST00000122109 520 ntBASIC13.91□□□□□ -0.18
Sox3P53784 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC13.91□□□□□ -0.18
Sox3P53784 Gm6257-201ENSMUST00000163864 910 ntBASIC13.91□□□□□ -0.18
Sox3P53784 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Sox3P53784 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Sox3P53784 Rbfox2-208ENSMUST00000227930 1218 ntBASIC13.91□□□□□ -0.18
Sox3P53784 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC13.91□□□□□ -0.18
Sox3P53784 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sox3P53784 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Sox3P53784 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC13.91□□□□□ -0.18
Sox3P53784 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sox3P53784 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sox3P53784 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sox3P53784 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sox3P53784 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sox3P53784 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sox3P53784 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sox3P53784 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sox3P53784 Gm15163-201ENSMUST00000120749 1302 ntBASIC13.9□□□□□ -0.18
Sox3P53784 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Sox3P53784 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sox3P53784 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sox3P53784 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Sox3P53784 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sox3P53784 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC13.9□□□□□ -0.18
Sox3P53784 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sox3P53784 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Sox3P53784 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC13.9□□□□□ -0.18
Sox3P53784 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Sox3P53784 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Sox3P53784 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sox3P53784 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms