Protein–RNA interactions for Protein: P48298

Ccl11, Eotaxin, mousemouse

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl11P48298 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Ccl11P48298 Gm12428-201ENSMUST00000119844 727 ntBASIC12.29□□□□□ -0.44
Ccl11P48298 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC12.29□□□□□ -0.44
Ccl11P48298 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC12.29□□□□□ -0.44
Ccl11P48298 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ccl11P48298 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ccl11P48298 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC12.29□□□□□ -0.44
Ccl11P48298 Gm37230-201ENSMUST00000194491 818 ntBASIC12.29□□□□□ -0.44
Ccl11P48298 Gm44344-201ENSMUST00000200287 129 ntBASIC12.29□□□□□ -0.44
Ccl11P48298 Shd-206ENSMUST00000225145 998 ntBASIC12.29□□□□□ -0.44
Ccl11P48298 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccl11P48298 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ccl11P48298 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ccl11P48298 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccl11P48298 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC12.29□□□□□ -0.44
Ccl11P48298 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccl11P48298 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccl11P48298 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccl11P48298 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccl11P48298 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Ccl11P48298 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccl11P48298 AC148324.1-201ENSMUST00000219034 4240 ntBASIC12.29□□□□□ -0.44
Ccl11P48298 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccl11P48298 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccl11P48298 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC12.28□□□□□ -0.44
Ccl11P48298 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC12.28□□□□□ -0.44
Ccl11P48298 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccl11P48298 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC12.28□□□□□ -0.44
Ccl11P48298 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccl11P48298 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccl11P48298 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccl11P48298 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccl11P48298 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccl11P48298 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ccl11P48298 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccl11P48298 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccl11P48298 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccl11P48298 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccl11P48298 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Ccl11P48298 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
Ccl11P48298 Gm6222-201ENSMUST00000120787 396 ntBASIC12.28□□□□□ -0.44
Ccl11P48298 Mir1897-201ENSMUST00000122581 272 ntBASIC12.28□□□□□ -0.44
Ccl11P48298 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC12.28□□□□□ -0.44
Ccl11P48298 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC12.28□□□□□ -0.44
Ccl11P48298 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ccl11P48298 Mir7684-201ENSMUST00000183858 60 ntBASIC12.28□□□□□ -0.44
Ccl11P48298 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Ccl11P48298 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC12.28□□□□□ -0.44
Ccl11P48298 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC12.28□□□□□ -0.44
Ccl11P48298 AC125206.2-201ENSMUST00000217454 574 ntBASIC12.28□□□□□ -0.44
Ccl11P48298 Gm9063-201ENSMUST00000223299 582 ntBASIC12.28□□□□□ -0.44
Ccl11P48298 CT025535.1-201ENSMUST00000227172 491 ntBASIC12.28□□□□□ -0.44
Ccl11P48298 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccl11P48298 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccl11P48298 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccl11P48298 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccl11P48298 Gm13127-201ENSMUST00000118978 1389 ntBASIC12.28□□□□□ -0.44
Ccl11P48298 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccl11P48298 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccl11P48298 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ccl11P48298 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccl11P48298 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccl11P48298 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccl11P48298 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Ccl11P48298 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Ccl11P48298 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC12.27□□□□□ -0.44
Ccl11P48298 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC12.27□□□□□ -0.44
Ccl11P48298 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Ccl11P48298 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Ccl11P48298 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC12.27□□□□□ -0.44
Ccl11P48298 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Ccl11P48298 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Ccl11P48298 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Ccl11P48298 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC12.27□□□□□ -0.44
Ccl11P48298 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.44
Ccl11P48298 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Ccl11P48298 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ccl11P48298 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ccl11P48298 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Ccl11P48298 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC12.27□□□□□ -0.45
Ccl11P48298 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ccl11P48298 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC12.27□□□□□ -0.45
Ccl11P48298 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC12.27□□□□□ -0.45
Ccl11P48298 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC12.27□□□□□ -0.45
Ccl11P48298 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC12.27□□□□□ -0.45
Ccl11P48298 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC12.27□□□□□ -0.45
Ccl11P48298 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ccl11P48298 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.45
Ccl11P48298 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Ccl11P48298 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ccl11P48298 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ccl11P48298 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ccl11P48298 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ccl11P48298 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ccl11P48298 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Ccl11P48298 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Ccl11P48298 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Ccl11P48298 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccl11P48298 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccl11P48298 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 68.5 ms