Protein–RNA interactions for Protein: P47806

Gli1, Zinc finger protein GLI1, mousemouse

Predictions only

Length 1,111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gli1P47806 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gli1P47806 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gli1P47806 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Gli1P47806 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gli1P47806 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC14.19□□□□□ -0.14
Gli1P47806 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC14.19□□□□□ -0.14
Gli1P47806 Gm11764-201ENSMUST00000120221 623 ntBASIC14.19□□□□□ -0.14
Gli1P47806 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gli1P47806 Gm5253-201ENSMUST00000187104 1025 ntBASIC14.19□□□□□ -0.14
Gli1P47806 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC14.19□□□□□ -0.14
Gli1P47806 Gm7229-201ENSMUST00000214719 1007 ntBASIC14.19□□□□□ -0.14
Gli1P47806 AC131709.1-201ENSMUST00000224731 1180 ntBASIC14.19□□□□□ -0.14
Gli1P47806 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gli1P47806 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gli1P47806 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gli1P47806 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gli1P47806 Mxra8os-201ENSMUST00000097740 687 ntBASIC14.19□□□□□ -0.14
Gli1P47806 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Gli1P47806 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Gli1P47806 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gli1P47806 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Gli1P47806 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gli1P47806 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gli1P47806 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gli1P47806 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gli1P47806 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gli1P47806 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gli1P47806 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Gli1P47806 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gli1P47806 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gli1P47806 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gli1P47806 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Gli1P47806 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gli1P47806 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gli1P47806 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Gli1P47806 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
Gli1P47806 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gli1P47806 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Gli1P47806 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Gli1P47806 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Gli1P47806 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC14.18□□□□□ -0.14
Gli1P47806 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Gli1P47806 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gli1P47806 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gli1P47806 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
Gli1P47806 Gm11025-201ENSMUST00000140773 466 ntBASIC14.18□□□□□ -0.14
Gli1P47806 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Gli1P47806 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC14.18□□□□□ -0.14
Gli1P47806 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC14.18□□□□□ -0.14
Gli1P47806 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC14.18□□□□□ -0.14
Gli1P47806 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC14.18□□□□□ -0.14
Gli1P47806 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC14.18□□□□□ -0.14
Gli1P47806 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
Gli1P47806 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
Gli1P47806 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gli1P47806 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Gli1P47806 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gli1P47806 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gli1P47806 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC14.18□□□□□ -0.14
Gli1P47806 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gli1P47806 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gli1P47806 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gli1P47806 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gli1P47806 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Gli1P47806 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gli1P47806 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Gli1P47806 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gli1P47806 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gli1P47806 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gli1P47806 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gli1P47806 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gli1P47806 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Gli1P47806 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC14.17□□□□□ -0.14
Gli1P47806 Gm44645-201ENSMUST00000205492 1653 ntBASIC14.17□□□□□ -0.14
Gli1P47806 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gli1P47806 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gli1P47806 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gli1P47806 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Gli1P47806 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gli1P47806 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gli1P47806 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Gli1P47806 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gli1P47806 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Gli1P47806 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC14.17□□□□□ -0.14
Gli1P47806 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Gli1P47806 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gli1P47806 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
Gli1P47806 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gli1P47806 Gm5682-201ENSMUST00000173402 505 ntBASIC14.17□□□□□ -0.14
Gli1P47806 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Gli1P47806 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gli1P47806 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gli1P47806 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gli1P47806 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gli1P47806 Gm43399-201ENSMUST00000202546 2374 ntBASIC14.17□□□□□ -0.14
Gli1P47806 Gm29361-201ENSMUST00000183323 2000 ntBASIC14.17□□□□□ -0.14
Gli1P47806 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gli1P47806 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Gli1P47806 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC14.17□□□□□ -0.14
Gli1P47806 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms