Protein–RNA interactions for Protein: P43488

Tnfsf4, Tumor necrosis factor ligand superfamily member 4, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf4P43488 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.16
Tnfsf4P43488 AC166574.6-201ENSMUST00000227889 1806 ntBASIC14.02□□□□□ -0.16
Tnfsf4P43488 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
Tnfsf4P43488 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Tnfsf4P43488 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Tnfsf4P43488 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC14.02□□□□□ -0.16
Tnfsf4P43488 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Tnfsf4P43488 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC14.02□□□□□ -0.17
Tnfsf4P43488 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Tnfsf4P43488 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Tnfsf4P43488 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Tnfsf4P43488 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Tnfsf4P43488 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Tnfsf4P43488 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC14.02□□□□□ -0.17
Tnfsf4P43488 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Tnfsf4P43488 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC14.02□□□□□ -0.17
Tnfsf4P43488 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Tnfsf4P43488 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Tnfsf4P43488 Gm4691-201ENSMUST00000182339 1000 ntBASIC14.02□□□□□ -0.17
Tnfsf4P43488 Mir8098-201ENSMUST00000184011 137 ntBASIC14.02□□□□□ -0.17
Tnfsf4P43488 Gm17971-201ENSMUST00000190239 806 ntBASIC14.02□□□□□ -0.17
Tnfsf4P43488 Gm8597-201ENSMUST00000191525 1109 ntBASIC14.02□□□□□ -0.17
Tnfsf4P43488 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Tnfsf4P43488 Gm2451-201ENSMUST00000199447 999 ntBASIC14.02□□□□□ -0.17
Tnfsf4P43488 Gm10290-201ENSMUST00000200451 999 ntBASIC14.02□□□□□ -0.17
Tnfsf4P43488 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Tnfsf4P43488 Olfr286-202ENSMUST00000205305 969 ntBASIC14.02□□□□□ -0.17
Tnfsf4P43488 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC14.02□□□□□ -0.17
Tnfsf4P43488 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC14.02□□□□□ -0.17
Tnfsf4P43488 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Tnfsf4P43488 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Tnfsf4P43488 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Tnfsf4P43488 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Tnfsf4P43488 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Tnfsf4P43488 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Tnfsf4P43488 Gm38391-201ENSMUST00000191720 4069 ntBASIC14.02□□□□□ -0.17
Tnfsf4P43488 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Tnfsf4P43488 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.17
Tnfsf4P43488 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC14.01□□□□□ -0.17
Tnfsf4P43488 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tnfsf4P43488 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tnfsf4P43488 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tnfsf4P43488 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tnfsf4P43488 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tnfsf4P43488 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
Tnfsf4P43488 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tnfsf4P43488 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tnfsf4P43488 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tnfsf4P43488 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Tnfsf4P43488 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Tnfsf4P43488 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Tnfsf4P43488 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tnfsf4P43488 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tnfsf4P43488 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Tnfsf4P43488 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC14.01□□□□□ -0.17
Tnfsf4P43488 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Tnfsf4P43488 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Tnfsf4P43488 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC14.01□□□□□ -0.17
Tnfsf4P43488 Gm2272-201ENSMUST00000194903 582 ntBASIC14.01□□□□□ -0.17
Tnfsf4P43488 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC14.01□□□□□ -0.17
Tnfsf4P43488 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Tnfsf4P43488 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC14.01□□□□□ -0.17
Tnfsf4P43488 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tnfsf4P43488 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC14.01□□□□□ -0.17
Tnfsf4P43488 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tnfsf4P43488 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Tnfsf4P43488 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Tnfsf4P43488 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tnfsf4P43488 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tnfsf4P43488 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Tnfsf4P43488 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tnfsf4P43488 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tnfsf4P43488 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC14.01□□□□□ -0.17
Tnfsf4P43488 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tnfsf4P43488 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tnfsf4P43488 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tnfsf4P43488 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC14.01□□□□□ -0.17
Tnfsf4P43488 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC14.01□□□□□ -0.17
Tnfsf4P43488 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC14.01□□□□□ -0.17
Tnfsf4P43488 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tnfsf4P43488 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tnfsf4P43488 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tnfsf4P43488 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tnfsf4P43488 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC14.01□□□□□ -0.17
Tnfsf4P43488 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Tnfsf4P43488 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tnfsf4P43488 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tnfsf4P43488 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
Tnfsf4P43488 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC14□□□□□ -0.17
Tnfsf4P43488 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC14□□□□□ -0.17
Tnfsf4P43488 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tnfsf4P43488 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC14□□□□□ -0.17
Tnfsf4P43488 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC14□□□□□ -0.17
Tnfsf4P43488 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Tnfsf4P43488 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC14□□□□□ -0.17
Tnfsf4P43488 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tnfsf4P43488 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tnfsf4P43488 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
Tnfsf4P43488 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tnfsf4P43488 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms