Protein–RNA interactions for Protein: P43407

Sdc2, Syndecan-2, mousemouse

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc2P43407 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Sdc2P43407 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sdc2P43407 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Sdc2P43407 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sdc2P43407 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC16.3■□□□□ 0.2
Sdc2P43407 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sdc2P43407 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sdc2P43407 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sdc2P43407 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sdc2P43407 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sdc2P43407 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sdc2P43407 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sdc2P43407 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Sdc2P43407 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sdc2P43407 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC16.29■□□□□ 0.2
Sdc2P43407 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Sdc2P43407 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sdc2P43407 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sdc2P43407 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sdc2P43407 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sdc2P43407 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sdc2P43407 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sdc2P43407 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC16.29■□□□□ 0.2
Sdc2P43407 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC16.29■□□□□ 0.2
Sdc2P43407 Gm16026-204ENSMUST00000162652 683 ntBASIC16.29■□□□□ 0.2
Sdc2P43407 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sdc2P43407 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Sdc2P43407 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC16.29■□□□□ 0.2
Sdc2P43407 Gm2651-201ENSMUST00000203560 838 ntBASIC16.29■□□□□ 0.2
Sdc2P43407 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC16.29■□□□□ 0.2
Sdc2P43407 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Sdc2P43407 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC16.29■□□□□ 0.2
Sdc2P43407 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC16.29■□□□□ 0.2
Sdc2P43407 AC155729.1-201ENSMUST00000227758 544 ntBASIC16.29■□□□□ 0.2
Sdc2P43407 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sdc2P43407 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sdc2P43407 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sdc2P43407 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sdc2P43407 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Sdc2P43407 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Sdc2P43407 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sdc2P43407 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sdc2P43407 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sdc2P43407 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sdc2P43407 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sdc2P43407 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sdc2P43407 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Sdc2P43407 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Sdc2P43407 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sdc2P43407 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sdc2P43407 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Sdc2P43407 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sdc2P43407 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Sdc2P43407 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC16.28■□□□□ 0.2
Sdc2P43407 Gm16198-201ENSMUST00000118766 670 ntBASIC16.28■□□□□ 0.2
Sdc2P43407 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sdc2P43407 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC16.28■□□□□ 0.2
Sdc2P43407 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sdc2P43407 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Sdc2P43407 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC16.28■□□□□ 0.2
Sdc2P43407 Olfr286-202ENSMUST00000205305 969 ntBASIC16.28■□□□□ 0.2
Sdc2P43407 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC16.28■□□□□ 0.2
Sdc2P43407 AC138767.1-201ENSMUST00000222661 415 ntBASIC16.28■□□□□ 0.2
Sdc2P43407 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sdc2P43407 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sdc2P43407 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC16.28■□□□□ 0.2
Sdc2P43407 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC16.28■□□□□ 0.2
Sdc2P43407 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sdc2P43407 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sdc2P43407 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Sdc2P43407 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Sdc2P43407 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Sdc2P43407 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sdc2P43407 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Sdc2P43407 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Sdc2P43407 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Sdc2P43407 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.2
Sdc2P43407 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Sdc2P43407 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC16.27■□□□□ 0.2
Sdc2P43407 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sdc2P43407 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sdc2P43407 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sdc2P43407 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sdc2P43407 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC16.27■□□□□ 0.2
Sdc2P43407 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sdc2P43407 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sdc2P43407 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC16.27■□□□□ 0.2
Sdc2P43407 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sdc2P43407 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC16.27■□□□□ 0.2
Sdc2P43407 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC16.27■□□□□ 0.2
Sdc2P43407 Gm6944-201ENSMUST00000182449 1006 ntBASIC16.27■□□□□ 0.2
Sdc2P43407 Mir7036b-201ENSMUST00000184791 63 ntBASIC16.27■□□□□ 0.2
Sdc2P43407 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC16.27■□□□□ 0.2
Sdc2P43407 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sdc2P43407 AC122901.1-201ENSMUST00000214203 1790 ntBASIC16.27■□□□□ 0.2
Sdc2P43407 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sdc2P43407 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sdc2P43407 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Sdc2P43407 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Sdc2P43407 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms