Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Gm14452-201ENSMUST00000118680 1632 ntBASIC13.73□□□□□ -0.21
Cdx2P43241 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cdx2P43241 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Cdx2P43241 Gm15678-201ENSMUST00000117573 960 ntBASIC13.73□□□□□ -0.21
Cdx2P43241 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Cdx2P43241 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC13.73□□□□□ -0.21
Cdx2P43241 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cdx2P43241 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC13.73□□□□□ -0.21
Cdx2P43241 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Cdx2P43241 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Cdx2P43241 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cdx2P43241 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cdx2P43241 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Cdx2P43241 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC13.73□□□□□ -0.21
Cdx2P43241 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cdx2P43241 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Cdx2P43241 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Cdx2P43241 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC13.73□□□□□ -0.21
Cdx2P43241 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Cdx2P43241 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cdx2P43241 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cdx2P43241 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Cdx2P43241 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cdx2P43241 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cdx2P43241 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cdx2P43241 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cdx2P43241 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cdx2P43241 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC13.72□□□□□ -0.21
Cdx2P43241 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Cdx2P43241 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cdx2P43241 Gm11425-201ENSMUST00000119608 498 ntBASIC13.72□□□□□ -0.21
Cdx2P43241 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Cdx2P43241 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cdx2P43241 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC13.72□□□□□ -0.21
Cdx2P43241 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC13.72□□□□□ -0.21
Cdx2P43241 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC13.72□□□□□ -0.21
Cdx2P43241 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC13.72□□□□□ -0.21
Cdx2P43241 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Cdx2P43241 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC13.72□□□□□ -0.21
Cdx2P43241 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cdx2P43241 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC13.72□□□□□ -0.21
Cdx2P43241 Gm9396-201ENSMUST00000076703 567 ntBASIC13.72□□□□□ -0.21
Cdx2P43241 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Cdx2P43241 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Cdx2P43241 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cdx2P43241 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Cdx2P43241 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cdx2P43241 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cdx2P43241 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Cdx2P43241 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cdx2P43241 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cdx2P43241 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Cdx2P43241 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Cdx2P43241 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cdx2P43241 Gm9252-201ENSMUST00000172364 1602 ntBASIC13.72□□□□□ -0.21
Cdx2P43241 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Cdx2P43241 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cdx2P43241 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cdx2P43241 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cdx2P43241 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Cdx2P43241 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cdx2P43241 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cdx2P43241 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cdx2P43241 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Cdx2P43241 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Cdx2P43241 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cdx2P43241 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cdx2P43241 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Cdx2P43241 Gm4984-201ENSMUST00000115987 360 ntBASIC13.71□□□□□ -0.21
Cdx2P43241 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC13.71□□□□□ -0.21
Cdx2P43241 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC13.71□□□□□ -0.21
Cdx2P43241 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC13.71□□□□□ -0.21
Cdx2P43241 Mir1938-201ENSMUST00000158746 100 ntBASIC13.71□□□□□ -0.21
Cdx2P43241 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cdx2P43241 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC13.71□□□□□ -0.21
Cdx2P43241 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Cdx2P43241 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC13.71□□□□□ -0.21
Cdx2P43241 Gm43630-201ENSMUST00000201550 776 ntBASIC13.71□□□□□ -0.21
Cdx2P43241 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cdx2P43241 AC150560.1-201ENSMUST00000227731 1187 ntBASIC13.71□□□□□ -0.21
Cdx2P43241 AC154806.6-201ENSMUST00000228192 202 ntBASIC13.71□□□□□ -0.21
Cdx2P43241 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cdx2P43241 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cdx2P43241 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC13.71□□□□□ -0.21
Cdx2P43241 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC13.71□□□□□ -0.22
Cdx2P43241 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
Cdx2P43241 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
Cdx2P43241 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Cdx2P43241 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Cdx2P43241 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Cdx2P43241 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Cdx2P43241 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC13.71□□□□□ -0.22
Cdx2P43241 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Cdx2P43241 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Cdx2P43241 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Cdx2P43241 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Cdx2P43241 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cdx2P43241 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cdx2P43241 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Cdx2P43241 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 56.3 ms