Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
HttP42859 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
HttP42859 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
HttP42859 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HttP42859 Gm4909-201ENSMUST00000118749 794 ntBASIC15.15■□□□□ 0.02
HttP42859 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HttP42859 Gm24990-201ENSMUST00000157406 323 ntBASIC15.15■□□□□ 0.02
HttP42859 Gm25732-201ENSMUST00000175168 60 ntBASIC15.15■□□□□ 0.02
HttP42859 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
HttP42859 Gm37419-201ENSMUST00000210705 114 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
HttP42859 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
HttP42859 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
HttP42859 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
HttP42859 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
HttP42859 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HttP42859 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
HttP42859 Gm3756-201ENSMUST00000169182 1355 ntBASIC15.15■□□□□ 0.02
HttP42859 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC15.15■□□□□ 0.02
HttP42859 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC15.15■□□□□ 0.02
HttP42859 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
HttP42859 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HttP42859 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HttP42859 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
HttP42859 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
HttP42859 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC15.15■□□□□ 0.02
HttP42859 Abhd11os-203ENSMUST00000222613 363 ntBASIC15.15■□□□□ 0.02
HttP42859 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
HttP42859 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HttP42859 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HttP42859 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC15.14■□□□□ 0.01
HttP42859 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
HttP42859 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HttP42859 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC15.14■□□□□ 0.01
HttP42859 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC15.14■□□□□ 0.01
HttP42859 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
HttP42859 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC15.14■□□□□ 0.01
HttP42859 AC166997.1-201ENSMUST00000225122 572 ntBASIC15.14■□□□□ 0.01
HttP42859 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HttP42859 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
HttP42859 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
HttP42859 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
HttP42859 Gm43352-201ENSMUST00000196419 3065 ntBASIC15.14■□□□□ 0.01
HttP42859 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
HttP42859 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
HttP42859 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
HttP42859 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HttP42859 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HttP42859 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC15.14■□□□□ 0.01
HttP42859 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
HttP42859 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
HttP42859 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
HttP42859 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC15.14■□□□□ 0.01
HttP42859 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
HttP42859 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HttP42859 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC15.14■□□□□ 0.01
HttP42859 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HttP42859 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HttP42859 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
HttP42859 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HttP42859 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
HttP42859 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC15.13■□□□□ 0.01
HttP42859 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HttP42859 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC15.13■□□□□ 0.01
HttP42859 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HttP42859 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC15.13■□□□□ 0.01
HttP42859 Gm5687-201ENSMUST00000118252 640 ntBASIC15.13■□□□□ 0.01
HttP42859 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
HttP42859 Gm5637-201ENSMUST00000153890 1119 ntBASIC15.13■□□□□ 0.01
HttP42859 Gm37497-201ENSMUST00000195830 798 ntBASIC15.13■□□□□ 0.01
HttP42859 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
HttP42859 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
HttP42859 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HttP42859 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HttP42859 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HttP42859 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC15.13■□□□□ 0.01
HttP42859 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
HttP42859 Gm9726-201ENSMUST00000180321 678 ntBASIC15.13■□□□□ 0.01
HttP42859 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC15.13■□□□□ 0.01
HttP42859 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HttP42859 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HttP42859 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HttP42859 AC161252.3-201ENSMUST00000225465 1549 ntBASIC15.13■□□□□ 0.01
HttP42859 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC15.13■□□□□ 0.01
HttP42859 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC15.13■□□□□ 0.01
HttP42859 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
HttP42859 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC15.13■□□□□ 0.01
HttP42859 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HttP42859 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
HttP42859 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC15.12■□□□□ 0.01
HttP42859 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
HttP42859 Gm27320-201ENSMUST00000184892 109 ntBASIC15.12■□□□□ 0.01
HttP42859 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HttP42859 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
HttP42859 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
HttP42859 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HttP42859 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
HttP42859 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
HttP42859 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
HttP42859 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HttP42859 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms