Protein–RNA interactions for Protein: P41272

Cd27, CD27 antigen, mousemouse

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd27P41272 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC11.64□□□□□ -0.55
Cd27P41272 Gm9182-201ENSMUST00000217829 639 ntBASIC11.64□□□□□ -0.55
Cd27P41272 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cd27P41272 Gm8396-201ENSMUST00000057361 823 ntBASIC11.64□□□□□ -0.55
Cd27P41272 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC11.64□□□□□ -0.55
Cd27P41272 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Cd27P41272 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Cd27P41272 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cd27P41272 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cd27P41272 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cd27P41272 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cd27P41272 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Cd27P41272 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cd27P41272 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Cd27P41272 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cd27P41272 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Cd27P41272 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cd27P41272 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC11.63□□□□□ -0.55
Cd27P41272 Gm42466-201ENSMUST00000202099 1301 ntBASIC11.63□□□□□ -0.55
Cd27P41272 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cd27P41272 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC11.63□□□□□ -0.55
Cd27P41272 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Cd27P41272 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cd27P41272 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Cd27P41272 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cd27P41272 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cd27P41272 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cd27P41272 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cd27P41272 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cd27P41272 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC11.63□□□□□ -0.55
Cd27P41272 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cd27P41272 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cd27P41272 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Cd27P41272 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cd27P41272 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC11.63□□□□□ -0.55
Cd27P41272 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Cd27P41272 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC11.63□□□□□ -0.55
Cd27P41272 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Cd27P41272 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cd27P41272 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cd27P41272 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cd27P41272 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cd27P41272 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cd27P41272 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cd27P41272 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC11.63□□□□□ -0.55
Cd27P41272 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cd27P41272 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cd27P41272 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Cd27P41272 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cd27P41272 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Cd27P41272 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cd27P41272 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Cd27P41272 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cd27P41272 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cd27P41272 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cd27P41272 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cd27P41272 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cd27P41272 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cd27P41272 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cd27P41272 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cd27P41272 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC11.62□□□□□ -0.55
Cd27P41272 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Cd27P41272 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC11.62□□□□□ -0.55
Cd27P41272 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Cd27P41272 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC11.62□□□□□ -0.55
Cd27P41272 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cd27P41272 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cd27P41272 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
Cd27P41272 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Cd27P41272 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cd27P41272 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Cd27P41272 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Cd27P41272 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cd27P41272 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Cd27P41272 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC11.62□□□□□ -0.55
Cd27P41272 Gm5312-201ENSMUST00000203728 547 ntBASIC11.62□□□□□ -0.55
Cd27P41272 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Cd27P41272 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cd27P41272 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Cd27P41272 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC11.62□□□□□ -0.55
Cd27P41272 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cd27P41272 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Cd27P41272 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cd27P41272 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
Cd27P41272 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cd27P41272 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cd27P41272 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cd27P41272 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cd27P41272 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cd27P41272 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC11.62□□□□□ -0.55
Cd27P41272 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cd27P41272 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Cd27P41272 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Cd27P41272 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cd27P41272 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cd27P41272 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cd27P41272 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cd27P41272 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Cd27P41272 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cd27P41272 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms