Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Sox6P40645 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Sox6P40645 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sox6P40645 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sox6P40645 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sox6P40645 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sox6P40645 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Sox6P40645 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Sox6P40645 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sox6P40645 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sox6P40645 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sox6P40645 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sox6P40645 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC13.66□□□□□ -0.22
Sox6P40645 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC13.66□□□□□ -0.22
Sox6P40645 Gm42670-201ENSMUST00000201816 1292 ntBASIC13.66□□□□□ -0.22
Sox6P40645 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sox6P40645 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sox6P40645 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC13.66□□□□□ -0.22
Sox6P40645 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sox6P40645 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
Sox6P40645 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sox6P40645 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sox6P40645 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sox6P40645 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sox6P40645 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Sox6P40645 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sox6P40645 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Sox6P40645 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sox6P40645 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sox6P40645 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sox6P40645 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sox6P40645 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sox6P40645 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sox6P40645 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sox6P40645 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Sox6P40645 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Sox6P40645 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Sox6P40645 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sox6P40645 Gm37691-201ENSMUST00000192147 2573 ntBASIC13.65□□□□□ -0.22
Sox6P40645 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sox6P40645 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sox6P40645 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Sox6P40645 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC13.65□□□□□ -0.22
Sox6P40645 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Sox6P40645 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sox6P40645 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sox6P40645 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC13.65□□□□□ -0.22
Sox6P40645 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC13.65□□□□□ -0.22
Sox6P40645 Gm44771-201ENSMUST00000206975 626 ntBASIC13.65□□□□□ -0.22
Sox6P40645 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC13.65□□□□□ -0.22
Sox6P40645 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC13.65□□□□□ -0.22
Sox6P40645 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sox6P40645 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sox6P40645 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sox6P40645 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sox6P40645 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sox6P40645 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sox6P40645 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sox6P40645 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sox6P40645 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC13.65□□□□□ -0.22
Sox6P40645 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sox6P40645 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
Sox6P40645 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC13.64□□□□□ -0.23
Sox6P40645 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sox6P40645 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC13.64□□□□□ -0.23
Sox6P40645 CT030684.3-201ENSMUST00000227308 2445 ntBASIC13.64□□□□□ -0.23
Sox6P40645 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Sox6P40645 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sox6P40645 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Sox6P40645 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sox6P40645 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sox6P40645 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sox6P40645 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC13.64□□□□□ -0.23
Sox6P40645 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sox6P40645 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sox6P40645 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC13.64□□□□□ -0.23
Sox6P40645 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sox6P40645 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC13.64□□□□□ -0.23
Sox6P40645 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC13.64□□□□□ -0.23
Sox6P40645 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Sox6P40645 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sox6P40645 Gm27628-201ENSMUST00000184911 107 ntBASIC13.64□□□□□ -0.23
Sox6P40645 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Sox6P40645 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC13.64□□□□□ -0.23
Sox6P40645 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sox6P40645 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Sox6P40645 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sox6P40645 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Sox6P40645 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Sox6P40645 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Sox6P40645 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Sox6P40645 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sox6P40645 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sox6P40645 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sox6P40645 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Sox6P40645 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Sox6P40645 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC13.63□□□□□ -0.23
Sox6P40645 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sox6P40645 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sox6P40645 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms