Protein–RNA interactions for Protein: P40240

Cd9, CD9 antigen, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd9P40240 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cd9P40240 Gm37411-201ENSMUST00000194180 2282 ntBASIC14.3□□□□□ -0.12
Cd9P40240 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cd9P40240 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Cd9P40240 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cd9P40240 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cd9P40240 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cd9P40240 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Cd9P40240 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cd9P40240 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cd9P40240 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cd9P40240 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Cd9P40240 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cd9P40240 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cd9P40240 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cd9P40240 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cd9P40240 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
Cd9P40240 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cd9P40240 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cd9P40240 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Cd9P40240 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cd9P40240 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Cd9P40240 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cd9P40240 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC14.29□□□□□ -0.12
Cd9P40240 Gm8116-201ENSMUST00000182917 1201 ntBASIC14.29□□□□□ -0.12
Cd9P40240 Gm44608-201ENSMUST00000206827 855 ntBASIC14.29□□□□□ -0.12
Cd9P40240 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cd9P40240 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cd9P40240 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cd9P40240 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cd9P40240 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cd9P40240 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cd9P40240 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cd9P40240 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC14.29□□□□□ -0.12
Cd9P40240 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cd9P40240 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cd9P40240 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC14.29□□□□□ -0.12
Cd9P40240 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cd9P40240 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cd9P40240 Gm38058-201ENSMUST00000194323 4368 ntBASIC14.29□□□□□ -0.12
Cd9P40240 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cd9P40240 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cd9P40240 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Cd9P40240 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cd9P40240 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cd9P40240 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cd9P40240 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cd9P40240 Gm9109-201ENSMUST00000120254 1405 ntBASIC14.28□□□□□ -0.12
Cd9P40240 Gm13365-201ENSMUST00000121188 973 ntBASIC14.28□□□□□ -0.12
Cd9P40240 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cd9P40240 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cd9P40240 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC14.28□□□□□ -0.12
Cd9P40240 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC14.28□□□□□ -0.12
Cd9P40240 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Cd9P40240 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC14.28□□□□□ -0.12
Cd9P40240 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cd9P40240 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cd9P40240 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cd9P40240 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cd9P40240 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cd9P40240 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Cd9P40240 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cd9P40240 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cd9P40240 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Cd9P40240 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cd9P40240 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cd9P40240 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cd9P40240 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cd9P40240 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Cd9P40240 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cd9P40240 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cd9P40240 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC14.27□□□□□ -0.12
Cd9P40240 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cd9P40240 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cd9P40240 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cd9P40240 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Cd9P40240 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cd9P40240 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cd9P40240 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cd9P40240 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Cd9P40240 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cd9P40240 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cd9P40240 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cd9P40240 Gm6018-201ENSMUST00000216090 1306 ntBASIC14.27□□□□□ -0.12
Cd9P40240 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC14.27□□□□□ -0.13
Cd9P40240 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC14.27□□□□□ -0.13
Cd9P40240 Ighv8-7-201ENSMUST00000194349 297 ntBASIC14.27□□□□□ -0.13
Cd9P40240 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC14.27□□□□□ -0.13
Cd9P40240 AC131690.1-201ENSMUST00000218406 374 ntBASIC14.27□□□□□ -0.13
Cd9P40240 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cd9P40240 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Cd9P40240 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cd9P40240 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cd9P40240 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cd9P40240 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cd9P40240 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Cd9P40240 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cd9P40240 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Cd9P40240 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC14.27□□□□□ -0.13
Cd9P40240 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms