Protein–RNA interactions for Protein: P39689

Cdkn1a, Cyclin-dependent kinase inhibitor 1, mousemouse

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn1aP39689 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cdkn1aP39689 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Cdkn1aP39689 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC11.97□□□□□ -0.49
Cdkn1aP39689 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cdkn1aP39689 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC11.97□□□□□ -0.49
Cdkn1aP39689 Gm6222-201ENSMUST00000120787 396 ntBASIC11.97□□□□□ -0.49
Cdkn1aP39689 Gm14767-201ENSMUST00000121559 586 ntBASIC11.97□□□□□ -0.49
Cdkn1aP39689 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC11.97□□□□□ -0.49
Cdkn1aP39689 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cdkn1aP39689 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
Cdkn1aP39689 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cdkn1aP39689 Gm27533-201ENSMUST00000183800 152 ntBASIC11.97□□□□□ -0.49
Cdkn1aP39689 Gm27989-201ENSMUST00000184721 107 ntBASIC11.97□□□□□ -0.49
Cdkn1aP39689 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC11.97□□□□□ -0.49
Cdkn1aP39689 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Cdkn1aP39689 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cdkn1aP39689 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Cdkn1aP39689 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cdkn1aP39689 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Cdkn1aP39689 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC11.97□□□□□ -0.49
Cdkn1aP39689 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cdkn1aP39689 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Cdkn1aP39689 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Cdkn1aP39689 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cdkn1aP39689 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC11.97□□□□□ -0.49
Cdkn1aP39689 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cdkn1aP39689 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Cdkn1aP39689 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cdkn1aP39689 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cdkn1aP39689 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cdkn1aP39689 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cdkn1aP39689 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cdkn1aP39689 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC11.97□□□□□ -0.49
Cdkn1aP39689 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cdkn1aP39689 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC11.97□□□□□ -0.49
Cdkn1aP39689 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cdkn1aP39689 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cdkn1aP39689 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Cdkn1aP39689 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cdkn1aP39689 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC11.96□□□□□ -0.49
Cdkn1aP39689 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cdkn1aP39689 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Cdkn1aP39689 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cdkn1aP39689 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cdkn1aP39689 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC11.96□□□□□ -0.49
Cdkn1aP39689 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Cdkn1aP39689 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cdkn1aP39689 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC11.96□□□□□ -0.49
Cdkn1aP39689 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC11.96□□□□□ -0.49
Cdkn1aP39689 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Cdkn1aP39689 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Cdkn1aP39689 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cdkn1aP39689 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Cdkn1aP39689 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Cdkn1aP39689 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC11.96□□□□□ -0.49
Cdkn1aP39689 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cdkn1aP39689 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC11.96□□□□□ -0.49
Cdkn1aP39689 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Cdkn1aP39689 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cdkn1aP39689 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cdkn1aP39689 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC11.96□□□□□ -0.49
Cdkn1aP39689 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Cdkn1aP39689 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC11.96□□□□□ -0.49
Cdkn1aP39689 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC11.96□□□□□ -0.49
Cdkn1aP39689 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC11.96□□□□□ -0.49
Cdkn1aP39689 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Cdkn1aP39689 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC11.96□□□□□ -0.49
Cdkn1aP39689 Gm7063-201ENSMUST00000186840 981 ntBASIC11.96□□□□□ -0.49
Cdkn1aP39689 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cdkn1aP39689 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cdkn1aP39689 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cdkn1aP39689 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cdkn1aP39689 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cdkn1aP39689 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cdkn1aP39689 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cdkn1aP39689 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Cdkn1aP39689 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Cdkn1aP39689 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
Cdkn1aP39689 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
Cdkn1aP39689 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Cdkn1aP39689 Efs-202ENSMUST00000227037 2540 ntBASIC11.96□□□□□ -0.5
Cdkn1aP39689 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
Cdkn1aP39689 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Cdkn1aP39689 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Cdkn1aP39689 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Cdkn1aP39689 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Cdkn1aP39689 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Cdkn1aP39689 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
Cdkn1aP39689 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cdkn1aP39689 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cdkn1aP39689 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Cdkn1aP39689 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cdkn1aP39689 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cdkn1aP39689 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cdkn1aP39689 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Cdkn1aP39689 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC11.95□□□□□ -0.5
Cdkn1aP39689 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cdkn1aP39689 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cdkn1aP39689 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cdkn1aP39689 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC11.95□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms