Protein–RNA interactions for Protein: P31041

Cd28, T-cell-specific surface glycoprotein CD28, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd28P31041 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cd28P31041 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC12.81□□□□□ -0.36
Cd28P31041 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Cd28P31041 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cd28P31041 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Cd28P31041 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cd28P31041 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cd28P31041 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cd28P31041 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cd28P31041 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC12.81□□□□□ -0.36
Cd28P31041 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cd28P31041 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cd28P31041 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cd28P31041 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cd28P31041 Gm4081-201ENSMUST00000195287 1838 ntBASIC12.81□□□□□ -0.36
Cd28P31041 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cd28P31041 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cd28P31041 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC12.81□□□□□ -0.36
Cd28P31041 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cd28P31041 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Cd28P31041 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cd28P31041 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Cd28P31041 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC12.81□□□□□ -0.36
Cd28P31041 Ssr1-204ENSMUST00000225319 1610 ntBASIC12.8□□□□□ -0.36
Cd28P31041 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cd28P31041 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cd28P31041 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Cd28P31041 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC12.8□□□□□ -0.36
Cd28P31041 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cd28P31041 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cd28P31041 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Cd28P31041 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cd28P31041 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cd28P31041 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cd28P31041 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cd28P31041 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC12.8□□□□□ -0.36
Cd28P31041 Gm5184-201ENSMUST00000220417 1702 ntBASIC12.8□□□□□ -0.36
Cd28P31041 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cd28P31041 Gm26513-201ENSMUST00000181802 2489 ntBASIC12.8□□□□□ -0.36
Cd28P31041 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cd28P31041 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cd28P31041 Gm7935-201ENSMUST00000100555 1278 ntBASIC12.8□□□□□ -0.36
Cd28P31041 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cd28P31041 Gm6296-201ENSMUST00000222599 943 ntBASIC12.8□□□□□ -0.36
Cd28P31041 AC124569.2-201ENSMUST00000225998 818 ntBASIC12.8□□□□□ -0.36
Cd28P31041 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cd28P31041 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cd28P31041 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cd28P31041 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cd28P31041 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Cd28P31041 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cd28P31041 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cd28P31041 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cd28P31041 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cd28P31041 Gm30238-201ENSMUST00000195528 2603 ntBASIC12.8□□□□□ -0.36
Cd28P31041 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC12.8□□□□□ -0.36
Cd28P31041 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cd28P31041 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Cd28P31041 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cd28P31041 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Cd28P31041 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cd28P31041 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Cd28P31041 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cd28P31041 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cd28P31041 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC12.79□□□□□ -0.36
Cd28P31041 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cd28P31041 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cd28P31041 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cd28P31041 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cd28P31041 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Cd28P31041 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC12.79□□□□□ -0.36
Cd28P31041 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC12.79□□□□□ -0.36
Cd28P31041 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cd28P31041 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC12.79□□□□□ -0.36
Cd28P31041 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC12.79□□□□□ -0.36
Cd28P31041 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Cd28P31041 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cd28P31041 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cd28P31041 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cd28P31041 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cd28P31041 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cd28P31041 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC12.79□□□□□ -0.36
Cd28P31041 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC12.79□□□□□ -0.36
Cd28P31041 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cd28P31041 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC12.79□□□□□ -0.36
Cd28P31041 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cd28P31041 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cd28P31041 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cd28P31041 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cd28P31041 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC12.79□□□□□ -0.36
Cd28P31041 AC151836.1-202ENSMUST00000226259 753 ntBASIC12.79□□□□□ -0.36
Cd28P31041 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cd28P31041 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Cd28P31041 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cd28P31041 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cd28P31041 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cd28P31041 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Cd28P31041 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cd28P31041 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cd28P31041 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms