Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nedd8P29595 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nedd8P29595 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nedd8P29595 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Nedd8P29595 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nedd8P29595 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nedd8P29595 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nedd8P29595 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nedd8P29595 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Nedd8P29595 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Nedd8P29595 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nedd8P29595 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Nedd8P29595 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nedd8P29595 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nedd8P29595 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nedd8P29595 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Nedd8P29595 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Nedd8P29595 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nedd8P29595 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Nedd8P29595 Gm8318-201ENSMUST00000182954 872 ntBASIC13.42□□□□□ -0.26
Nedd8P29595 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC13.42□□□□□ -0.26
Nedd8P29595 Gm43767-201ENSMUST00000198933 381 ntBASIC13.42□□□□□ -0.26
Nedd8P29595 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nedd8P29595 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC13.42□□□□□ -0.26
Nedd8P29595 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nedd8P29595 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nedd8P29595 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nedd8P29595 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nedd8P29595 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nedd8P29595 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC13.42□□□□□ -0.26
Nedd8P29595 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nedd8P29595 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC13.42□□□□□ -0.26
Nedd8P29595 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nedd8P29595 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC13.42□□□□□ -0.26
Nedd8P29595 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Nedd8P29595 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nedd8P29595 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nedd8P29595 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Nedd8P29595 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nedd8P29595 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Nedd8P29595 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nedd8P29595 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Nedd8P29595 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nedd8P29595 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nedd8P29595 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Nedd8P29595 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC13.41□□□□□ -0.26
Nedd8P29595 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nedd8P29595 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nedd8P29595 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nedd8P29595 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nedd8P29595 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC13.41□□□□□ -0.26
Nedd8P29595 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Nedd8P29595 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
Nedd8P29595 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC13.41□□□□□ -0.26
Nedd8P29595 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nedd8P29595 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Nedd8P29595 AC121801.1-201ENSMUST00000225363 1899 ntBASIC13.41□□□□□ -0.26
Nedd8P29595 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nedd8P29595 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Nedd8P29595 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nedd8P29595 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nedd8P29595 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Nedd8P29595 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Nedd8P29595 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nedd8P29595 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Nedd8P29595 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nedd8P29595 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nedd8P29595 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Nedd8P29595 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nedd8P29595 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC13.41□□□□□ -0.26
Nedd8P29595 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nedd8P29595 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC13.4□□□□□ -0.26
Nedd8P29595 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nedd8P29595 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Nedd8P29595 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC13.4□□□□□ -0.26
Nedd8P29595 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nedd8P29595 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nedd8P29595 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nedd8P29595 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Nedd8P29595 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Nedd8P29595 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nedd8P29595 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nedd8P29595 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nedd8P29595 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Nedd8P29595 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nedd8P29595 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nedd8P29595 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nedd8P29595 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC13.4□□□□□ -0.26
Nedd8P29595 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC13.4□□□□□ -0.26
Nedd8P29595 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Nedd8P29595 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC13.4□□□□□ -0.26
Nedd8P29595 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nedd8P29595 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nedd8P29595 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC13.4□□□□□ -0.26
Nedd8P29595 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nedd8P29595 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nedd8P29595 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Nedd8P29595 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nedd8P29595 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nedd8P29595 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms