Protein–RNA interactions for Protein: P28660

Nckap1, Nck-associated protein 1, mousemouse

Known RBP Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1P28660 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nckap1P28660 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nckap1P28660 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nckap1P28660 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nckap1P28660 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nckap1P28660 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nckap1P28660 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nckap1P28660 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Nckap1P28660 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Nckap1P28660 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nckap1P28660 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nckap1P28660 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nckap1P28660 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Nckap1P28660 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nckap1P28660 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nckap1P28660 Asic1-205ENSMUST00000228185 1818 ntBASIC14.44□□□□□ -0.1
Nckap1P28660 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Nckap1P28660 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC14.44□□□□□ -0.1
Nckap1P28660 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC14.44□□□□□ -0.1
Nckap1P28660 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nckap1P28660 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Nckap1P28660 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Nckap1P28660 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Nckap1P28660 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC14.44□□□□□ -0.1
Nckap1P28660 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nckap1P28660 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nckap1P28660 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nckap1P28660 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nckap1P28660 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Nckap1P28660 Gm43352-201ENSMUST00000196419 3065 ntBASIC14.44□□□□□ -0.1
Nckap1P28660 Tfap2a-203ENSMUST00000223869 2037 ntBASIC14.44□□□□□ -0.1
Nckap1P28660 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC14.44□□□□□ -0.1
Nckap1P28660 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC14.44□□□□□ -0.1
Nckap1P28660 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nckap1P28660 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nckap1P28660 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Nckap1P28660 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nckap1P28660 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Nckap1P28660 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC14.43□□□□□ -0.1
Nckap1P28660 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nckap1P28660 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC14.43□□□□□ -0.1
Nckap1P28660 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nckap1P28660 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nckap1P28660 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Nckap1P28660 Gm14719-201ENSMUST00000121891 340 ntBASIC14.43□□□□□ -0.1
Nckap1P28660 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Nckap1P28660 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Nckap1P28660 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
Nckap1P28660 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Nckap1P28660 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC14.43□□□□□ -0.1
Nckap1P28660 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nckap1P28660 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Nckap1P28660 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC14.43□□□□□ -0.1
Nckap1P28660 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Nckap1P28660 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nckap1P28660 Gm38058-201ENSMUST00000194323 4368 ntBASIC14.43□□□□□ -0.1
Nckap1P28660 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nckap1P28660 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nckap1P28660 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC14.43□□□□□ -0.1
Nckap1P28660 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
Nckap1P28660 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Nckap1P28660 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nckap1P28660 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Nckap1P28660 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nckap1P28660 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nckap1P28660 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nckap1P28660 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nckap1P28660 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC14.42□□□□□ -0.1
Nckap1P28660 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nckap1P28660 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Nckap1P28660 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Nckap1P28660 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Nckap1P28660 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Nckap1P28660 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC14.42□□□□□ -0.1
Nckap1P28660 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC14.42□□□□□ -0.1
Nckap1P28660 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC14.42□□□□□ -0.1
Nckap1P28660 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC14.42□□□□□ -0.1
Nckap1P28660 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC14.42□□□□□ -0.1
Nckap1P28660 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC14.42□□□□□ -0.1
Nckap1P28660 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC14.42□□□□□ -0.1
Nckap1P28660 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Nckap1P28660 Gm16215-201ENSMUST00000161990 637 ntBASIC14.42□□□□□ -0.1
Nckap1P28660 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Nckap1P28660 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Nckap1P28660 Olfr286-202ENSMUST00000205305 969 ntBASIC14.42□□□□□ -0.1
Nckap1P28660 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC14.42□□□□□ -0.1
Nckap1P28660 Gm46209-201ENSMUST00000217912 553 ntBASIC14.42□□□□□ -0.1
Nckap1P28660 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC14.42□□□□□ -0.1
Nckap1P28660 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nckap1P28660 AC132863.2-201ENSMUST00000226643 799 ntBASIC14.42□□□□□ -0.1
Nckap1P28660 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nckap1P28660 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nckap1P28660 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nckap1P28660 Gm2423-201ENSMUST00000074863 733 ntBASIC14.42□□□□□ -0.1
Nckap1P28660 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC14.42□□□□□ -0.1
Nckap1P28660 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Nckap1P28660 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nckap1P28660 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nckap1P28660 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nckap1P28660 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms