Protein–RNA interactions for Protein: P27784

Ccl6, C-C motif chemokine 6, mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl6P27784 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ccl6P27784 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ccl6P27784 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ccl6P27784 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ccl6P27784 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ccl6P27784 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ccl6P27784 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ccl6P27784 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Ccl6P27784 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ccl6P27784 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ccl6P27784 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ccl6P27784 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Ccl6P27784 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ccl6P27784 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ccl6P27784 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ccl6P27784 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC11.33□□□□□ -0.6
Ccl6P27784 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ccl6P27784 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ccl6P27784 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ccl6P27784 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Ccl6P27784 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Ccl6P27784 AC131586.3-201ENSMUST00000228355 1367 ntBASIC11.33□□□□□ -0.6
Ccl6P27784 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ccl6P27784 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ccl6P27784 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Ccl6P27784 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ccl6P27784 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ccl6P27784 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ccl6P27784 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Ccl6P27784 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Ccl6P27784 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ccl6P27784 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC11.33□□□□□ -0.6
Ccl6P27784 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC11.33□□□□□ -0.6
Ccl6P27784 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC11.33□□□□□ -0.6
Ccl6P27784 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Ccl6P27784 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC11.33□□□□□ -0.6
Ccl6P27784 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC11.33□□□□□ -0.6
Ccl6P27784 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC11.33□□□□□ -0.6
Ccl6P27784 Gm8597-201ENSMUST00000191525 1109 ntBASIC11.33□□□□□ -0.6
Ccl6P27784 Gm45747-201ENSMUST00000212203 999 ntBASIC11.33□□□□□ -0.6
Ccl6P27784 Thap2-203ENSMUST00000218989 527 ntBASIC11.33□□□□□ -0.6
Ccl6P27784 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC11.33□□□□□ -0.6
Ccl6P27784 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ccl6P27784 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ccl6P27784 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Ccl6P27784 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ccl6P27784 Mmp14-206ENSMUST00000225641 3238 ntBASIC11.33□□□□□ -0.6
Ccl6P27784 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ccl6P27784 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ccl6P27784 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ccl6P27784 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Ccl6P27784 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Ccl6P27784 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Ccl6P27784 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ccl6P27784 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ccl6P27784 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ccl6P27784 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Ccl6P27784 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC11.32□□□□□ -0.6
Ccl6P27784 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ccl6P27784 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ccl6P27784 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Ccl6P27784 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ccl6P27784 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ccl6P27784 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Ccl6P27784 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ccl6P27784 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
Ccl6P27784 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC11.32□□□□□ -0.6
Ccl6P27784 Gm27301-201ENSMUST00000184012 127 ntBASIC11.32□□□□□ -0.6
Ccl6P27784 Gm27525-201ENSMUST00000184465 107 ntBASIC11.32□□□□□ -0.6
Ccl6P27784 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC11.32□□□□□ -0.6
Ccl6P27784 Gm44492-201ENSMUST00000197012 141 ntBASIC11.32□□□□□ -0.6
Ccl6P27784 Gm44945-201ENSMUST00000206764 1187 ntBASIC11.32□□□□□ -0.6
Ccl6P27784 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ccl6P27784 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC11.32□□□□□ -0.6
Ccl6P27784 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC11.32□□□□□ -0.6
Ccl6P27784 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ccl6P27784 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ccl6P27784 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ccl6P27784 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ccl6P27784 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC11.32□□□□□ -0.6
Ccl6P27784 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC11.32□□□□□ -0.6
Ccl6P27784 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Ccl6P27784 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ccl6P27784 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ccl6P27784 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ccl6P27784 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Ccl6P27784 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC11.31□□□□□ -0.6
Ccl6P27784 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ccl6P27784 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ccl6P27784 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ccl6P27784 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ccl6P27784 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ccl6P27784 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ccl6P27784 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ccl6P27784 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Ccl6P27784 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ccl6P27784 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Ccl6P27784 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC11.31□□□□□ -0.6
Ccl6P27784 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC11.31□□□□□ -0.6
Ccl6P27784 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC11.31□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms