Protein–RNA interactions for Protein: P27664

Pde6a, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6aP27664 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pde6aP27664 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pde6aP27664 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC16.84■□□□□ 0.29
Pde6aP27664 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC16.84■□□□□ 0.29
Pde6aP27664 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pde6aP27664 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Pde6aP27664 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Pde6aP27664 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
Pde6aP27664 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Pde6aP27664 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC16.83■□□□□ 0.28
Pde6aP27664 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pde6aP27664 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pde6aP27664 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pde6aP27664 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC16.83■□□□□ 0.28
Pde6aP27664 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Pde6aP27664 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Pde6aP27664 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Pde6aP27664 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC16.83■□□□□ 0.28
Pde6aP27664 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pde6aP27664 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Pde6aP27664 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Pde6aP27664 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC16.83■□□□□ 0.28
Pde6aP27664 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC16.83■□□□□ 0.28
Pde6aP27664 Gm44981-201ENSMUST00000205549 1943 ntBASIC16.83■□□□□ 0.28
Pde6aP27664 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC16.83■□□□□ 0.28
Pde6aP27664 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pde6aP27664 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pde6aP27664 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pde6aP27664 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pde6aP27664 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pde6aP27664 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Pde6aP27664 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Pde6aP27664 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC16.83■□□□□ 0.28
Pde6aP27664 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC16.82■□□□□ 0.28
Pde6aP27664 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pde6aP27664 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Pde6aP27664 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pde6aP27664 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Pde6aP27664 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pde6aP27664 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC16.82■□□□□ 0.28
Pde6aP27664 Gm7336-201ENSMUST00000107041 1232 ntBASIC16.82■□□□□ 0.28
Pde6aP27664 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
Pde6aP27664 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC16.82■□□□□ 0.28
Pde6aP27664 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
Pde6aP27664 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pde6aP27664 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pde6aP27664 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC16.82■□□□□ 0.28
Pde6aP27664 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pde6aP27664 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pde6aP27664 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Pde6aP27664 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC16.82■□□□□ 0.28
Pde6aP27664 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pde6aP27664 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pde6aP27664 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pde6aP27664 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC16.82■□□□□ 0.28
Pde6aP27664 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pde6aP27664 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pde6aP27664 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pde6aP27664 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pde6aP27664 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Pde6aP27664 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pde6aP27664 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pde6aP27664 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Pde6aP27664 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Pde6aP27664 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pde6aP27664 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
Pde6aP27664 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pde6aP27664 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Pde6aP27664 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pde6aP27664 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pde6aP27664 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pde6aP27664 Gm15693-201ENSMUST00000120470 637 ntBASIC16.81■□□□□ 0.28
Pde6aP27664 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC16.81■□□□□ 0.28
Pde6aP27664 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC16.81■□□□□ 0.28
Pde6aP27664 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pde6aP27664 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pde6aP27664 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Pde6aP27664 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pde6aP27664 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pde6aP27664 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
Pde6aP27664 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pde6aP27664 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Pde6aP27664 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pde6aP27664 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pde6aP27664 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pde6aP27664 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pde6aP27664 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Pde6aP27664 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pde6aP27664 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pde6aP27664 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC16.8■□□□□ 0.28
Pde6aP27664 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pde6aP27664 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Pde6aP27664 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pde6aP27664 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Pde6aP27664 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Pde6aP27664 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Pde6aP27664 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC16.8■□□□□ 0.28
Pde6aP27664 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pde6aP27664 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pde6aP27664 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms