Protein–RNA interactions for Protein: P27548

Cd40lg, CD40 ligand, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40lgP27548 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cd40lgP27548 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cd40lgP27548 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cd40lgP27548 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC13.41□□□□□ -0.26
Cd40lgP27548 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Cd40lgP27548 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cd40lgP27548 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Cd40lgP27548 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cd40lgP27548 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC13.4□□□□□ -0.26
Cd40lgP27548 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Cd40lgP27548 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cd40lgP27548 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cd40lgP27548 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cd40lgP27548 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC13.4□□□□□ -0.26
Cd40lgP27548 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC13.4□□□□□ -0.26
Cd40lgP27548 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cd40lgP27548 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC13.4□□□□□ -0.26
Cd40lgP27548 Gm6226-201ENSMUST00000117765 1146 ntBASIC13.4□□□□□ -0.26
Cd40lgP27548 Gm16198-201ENSMUST00000118766 670 ntBASIC13.4□□□□□ -0.26
Cd40lgP27548 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cd40lgP27548 AC151286.1-201ENSMUST00000198489 145 ntBASIC13.4□□□□□ -0.26
Cd40lgP27548 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Cd40lgP27548 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC13.4□□□□□ -0.26
Cd40lgP27548 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC13.4□□□□□ -0.26
Cd40lgP27548 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC13.4□□□□□ -0.26
Cd40lgP27548 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cd40lgP27548 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cd40lgP27548 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Cd40lgP27548 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cd40lgP27548 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Cd40lgP27548 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Cd40lgP27548 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cd40lgP27548 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cd40lgP27548 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cd40lgP27548 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cd40lgP27548 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cd40lgP27548 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cd40lgP27548 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Cd40lgP27548 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Cd40lgP27548 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cd40lgP27548 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cd40lgP27548 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Cd40lgP27548 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cd40lgP27548 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC13.39□□□□□ -0.27
Cd40lgP27548 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
Cd40lgP27548 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC13.39□□□□□ -0.27
Cd40lgP27548 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cd40lgP27548 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cd40lgP27548 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cd40lgP27548 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cd40lgP27548 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cd40lgP27548 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cd40lgP27548 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cd40lgP27548 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cd40lgP27548 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Cd40lgP27548 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cd40lgP27548 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC13.39□□□□□ -0.27
Cd40lgP27548 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cd40lgP27548 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Cd40lgP27548 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Cd40lgP27548 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC13.39□□□□□ -0.27
Cd40lgP27548 Rprl2-201ENSMUST00000157150 290 ntBASIC13.39□□□□□ -0.27
Cd40lgP27548 Gm25911-201ENSMUST00000157621 56 ntBASIC13.39□□□□□ -0.27
Cd40lgP27548 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC13.39□□□□□ -0.27
Cd40lgP27548 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC13.39□□□□□ -0.27
Cd40lgP27548 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cd40lgP27548 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cd40lgP27548 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cd40lgP27548 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cd40lgP27548 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cd40lgP27548 AC126250.1-201ENSMUST00000228343 1768 ntBASIC13.39□□□□□ -0.27
Cd40lgP27548 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
Cd40lgP27548 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Cd40lgP27548 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Cd40lgP27548 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cd40lgP27548 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Cd40lgP27548 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cd40lgP27548 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cd40lgP27548 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC13.39□□□□□ -0.27
Cd40lgP27548 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
Cd40lgP27548 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cd40lgP27548 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC13.39□□□□□ -0.27
Cd40lgP27548 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Cd40lgP27548 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cd40lgP27548 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cd40lgP27548 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC13.39□□□□□ -0.27
Cd40lgP27548 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC13.39□□□□□ -0.27
Cd40lgP27548 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC13.39□□□□□ -0.27
Cd40lgP27548 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cd40lgP27548 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Cd40lgP27548 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cd40lgP27548 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Cd40lgP27548 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Cd40lgP27548 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Cd40lgP27548 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cd40lgP27548 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cd40lgP27548 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Cd40lgP27548 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cd40lgP27548 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cd40lgP27548 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC13.38□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms