Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col8a2P25318 Gm5357-201ENSMUST00000212720 1924 ntBASIC12.13□□□□□ -0.47
Col8a2P25318 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col8a2P25318 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Col8a2P25318 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col8a2P25318 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col8a2P25318 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col8a2P25318 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col8a2P25318 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col8a2P25318 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC12.12□□□□□ -0.47
Col8a2P25318 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col8a2P25318 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col8a2P25318 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col8a2P25318 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col8a2P25318 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col8a2P25318 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC12.12□□□□□ -0.47
Col8a2P25318 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Col8a2P25318 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Col8a2P25318 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
Col8a2P25318 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col8a2P25318 Gm27430-201ENSMUST00000184585 107 ntBASIC12.12□□□□□ -0.47
Col8a2P25318 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC12.12□□□□□ -0.47
Col8a2P25318 Gm44333-201ENSMUST00000197168 107 ntBASIC12.12□□□□□ -0.47
Col8a2P25318 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col8a2P25318 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col8a2P25318 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col8a2P25318 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col8a2P25318 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col8a2P25318 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Col8a2P25318 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col8a2P25318 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col8a2P25318 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col8a2P25318 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col8a2P25318 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Col8a2P25318 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col8a2P25318 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Col8a2P25318 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col8a2P25318 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC12.11□□□□□ -0.47
Col8a2P25318 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col8a2P25318 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Col8a2P25318 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col8a2P25318 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Col8a2P25318 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col8a2P25318 Gm43598-201ENSMUST00000202482 2479 ntBASIC12.11□□□□□ -0.47
Col8a2P25318 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC12.11□□□□□ -0.47
Col8a2P25318 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Col8a2P25318 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Col8a2P25318 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col8a2P25318 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Col8a2P25318 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Col8a2P25318 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC12.11□□□□□ -0.47
Col8a2P25318 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col8a2P25318 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC12.11□□□□□ -0.47
Col8a2P25318 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col8a2P25318 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Col8a2P25318 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col8a2P25318 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col8a2P25318 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col8a2P25318 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col8a2P25318 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col8a2P25318 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col8a2P25318 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Col8a2P25318 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col8a2P25318 Gm4081-201ENSMUST00000195287 1838 ntBASIC12.11□□□□□ -0.47
Col8a2P25318 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col8a2P25318 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col8a2P25318 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Col8a2P25318 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC12.11□□□□□ -0.47
Col8a2P25318 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC12.11□□□□□ -0.47
Col8a2P25318 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Col8a2P25318 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col8a2P25318 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Col8a2P25318 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col8a2P25318 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC12.11□□□□□ -0.47
Col8a2P25318 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Col8a2P25318 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Col8a2P25318 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Col8a2P25318 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Col8a2P25318 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC12.1□□□□□ -0.47
Col8a2P25318 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Col8a2P25318 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Col8a2P25318 Gm37297-201ENSMUST00000192974 2384 ntBASIC12.1□□□□□ -0.47
Col8a2P25318 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Col8a2P25318 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Col8a2P25318 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Col8a2P25318 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Col8a2P25318 Gm29310-201ENSMUST00000185468 696 ntBASIC12.1□□□□□ -0.47
Col8a2P25318 Gm21825-201ENSMUST00000185728 696 ntBASIC12.1□□□□□ -0.47
Col8a2P25318 Gm29109-201ENSMUST00000185895 696 ntBASIC12.1□□□□□ -0.47
Col8a2P25318 Gm21896-201ENSMUST00000186520 696 ntBASIC12.1□□□□□ -0.47
Col8a2P25318 Gm21873-201ENSMUST00000186728 696 ntBASIC12.1□□□□□ -0.47
Col8a2P25318 Gm21794-201ENSMUST00000187056 696 ntBASIC12.1□□□□□ -0.47
Col8a2P25318 Gm21880-201ENSMUST00000187275 696 ntBASIC12.1□□□□□ -0.47
Col8a2P25318 Gm21826-201ENSMUST00000187451 696 ntBASIC12.1□□□□□ -0.47
Col8a2P25318 Gm21198-201ENSMUST00000188393 696 ntBASIC12.1□□□□□ -0.47
Col8a2P25318 Gm21749-201ENSMUST00000189343 696 ntBASIC12.1□□□□□ -0.47
Col8a2P25318 Gm21901-201ENSMUST00000189568 696 ntBASIC12.1□□□□□ -0.47
Col8a2P25318 Gm29424-201ENSMUST00000189716 696 ntBASIC12.1□□□□□ -0.47
Col8a2P25318 Gm28599-201ENSMUST00000189838 694 ntBASIC12.1□□□□□ -0.47
Col8a2P25318 Gm21867-201ENSMUST00000189917 696 ntBASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 50.6 ms