Protein–RNA interactions for Protein: P18608

Hmgn1, Non-histone chromosomal protein HMG-14, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn1P18608 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC13.29□□□□□ -0.28
Hmgn1P18608 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC13.29□□□□□ -0.28
Hmgn1P18608 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Hmgn1P18608 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hmgn1P18608 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hmgn1P18608 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Hmgn1P18608 AC147366.1-201ENSMUST00000227671 852 ntBASIC13.29□□□□□ -0.28
Hmgn1P18608 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hmgn1P18608 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hmgn1P18608 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hmgn1P18608 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hmgn1P18608 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hmgn1P18608 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hmgn1P18608 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hmgn1P18608 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hmgn1P18608 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Hmgn1P18608 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Hmgn1P18608 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hmgn1P18608 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hmgn1P18608 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hmgn1P18608 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hmgn1P18608 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hmgn1P18608 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hmgn1P18608 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hmgn1P18608 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Hmgn1P18608 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hmgn1P18608 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hmgn1P18608 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hmgn1P18608 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hmgn1P18608 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Hmgn1P18608 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hmgn1P18608 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Hmgn1P18608 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Hmgn1P18608 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hmgn1P18608 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hmgn1P18608 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC13.28□□□□□ -0.28
Hmgn1P18608 AC025913.2-201ENSMUST00000220136 1766 ntBASIC13.28□□□□□ -0.28
Hmgn1P18608 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Hmgn1P18608 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hmgn1P18608 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hmgn1P18608 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hmgn1P18608 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hmgn1P18608 Gm25990-201ENSMUST00000102440 86 ntBASIC13.28□□□□□ -0.28
Hmgn1P18608 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hmgn1P18608 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
Hmgn1P18608 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC13.28□□□□□ -0.28
Hmgn1P18608 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hmgn1P18608 Olfr286-202ENSMUST00000205305 969 ntBASIC13.28□□□□□ -0.28
Hmgn1P18608 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Hmgn1P18608 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Hmgn1P18608 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hmgn1P18608 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hmgn1P18608 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hmgn1P18608 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Hmgn1P18608 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hmgn1P18608 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hmgn1P18608 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hmgn1P18608 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hmgn1P18608 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Hmgn1P18608 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hmgn1P18608 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Hmgn1P18608 AC131743.5-201ENSMUST00000220775 1618 ntBASIC13.28□□□□□ -0.28
Hmgn1P18608 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hmgn1P18608 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Hmgn1P18608 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
Hmgn1P18608 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Hmgn1P18608 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Hmgn1P18608 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.28
Hmgn1P18608 Ksr1-207ENSMUST00000226282 5260 ntBASIC13.27□□□□□ -0.28
Hmgn1P18608 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
Hmgn1P18608 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Hmgn1P18608 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Hmgn1P18608 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Hmgn1P18608 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC13.27□□□□□ -0.28
Hmgn1P18608 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Hmgn1P18608 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Hmgn1P18608 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Hmgn1P18608 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Hmgn1P18608 Gm6944-201ENSMUST00000182449 1006 ntBASIC13.27□□□□□ -0.29
Hmgn1P18608 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC13.27□□□□□ -0.29
Hmgn1P18608 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Hmgn1P18608 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Hmgn1P18608 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC13.27□□□□□ -0.29
Hmgn1P18608 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Hmgn1P18608 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Hmgn1P18608 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Hmgn1P18608 AC119177.1-201ENSMUST00000227647 1332 ntBASIC13.27□□□□□ -0.29
Hmgn1P18608 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Hmgn1P18608 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Hmgn1P18608 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Hmgn1P18608 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC13.27□□□□□ -0.29
Hmgn1P18608 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Hmgn1P18608 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Hmgn1P18608 Gm8096-201ENSMUST00000209921 1591 ntBASIC13.27□□□□□ -0.29
Hmgn1P18608 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Hmgn1P18608 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Hmgn1P18608 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Hmgn1P18608 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC13.27□□□□□ -0.29
Hmgn1P18608 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC13.27□□□□□ -0.29
Hmgn1P18608 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 58.2 ms