Protein–RNA interactions for Protein: P12960

Cntn1, Contactin-1, mousemouse

Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntn1P12960 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Cntn1P12960 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cntn1P12960 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Cntn1P12960 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cntn1P12960 AC159621.2-201ENSMUST00000223519 1326 ntBASIC13.92□□□□□ -0.18
Cntn1P12960 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cntn1P12960 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cntn1P12960 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Cntn1P12960 Gm45605-201ENSMUST00000210265 4269 ntBASIC13.92□□□□□ -0.18
Cntn1P12960 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Cntn1P12960 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cntn1P12960 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cntn1P12960 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
Cntn1P12960 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Cntn1P12960 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cntn1P12960 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cntn1P12960 Gm13223-201ENSMUST00000118609 747 ntBASIC13.92□□□□□ -0.18
Cntn1P12960 Gm13823-201ENSMUST00000119930 345 ntBASIC13.92□□□□□ -0.18
Cntn1P12960 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cntn1P12960 Mir7023-201ENSMUST00000185093 64 ntBASIC13.92□□□□□ -0.18
Cntn1P12960 Gm17837-201ENSMUST00000186435 985 ntBASIC13.92□□□□□ -0.18
Cntn1P12960 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC13.92□□□□□ -0.18
Cntn1P12960 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
Cntn1P12960 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC13.92□□□□□ -0.18
Cntn1P12960 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Cntn1P12960 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Cntn1P12960 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Cntn1P12960 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cntn1P12960 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
Cntn1P12960 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Cntn1P12960 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cntn1P12960 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cntn1P12960 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cntn1P12960 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cntn1P12960 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cntn1P12960 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC13.92□□□□□ -0.18
Cntn1P12960 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cntn1P12960 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC13.91□□□□□ -0.18
Cntn1P12960 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Cntn1P12960 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Cntn1P12960 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
Cntn1P12960 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cntn1P12960 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cntn1P12960 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Cntn1P12960 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Cntn1P12960 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC13.91□□□□□ -0.18
Cntn1P12960 Gm11960-202ENSMUST00000181063 2858 ntBASIC13.91□□□□□ -0.18
Cntn1P12960 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Cntn1P12960 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Cntn1P12960 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cntn1P12960 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Cntn1P12960 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC13.91□□□□□ -0.18
Cntn1P12960 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC13.91□□□□□ -0.18
Cntn1P12960 Gm28630-201ENSMUST00000187806 498 ntBASIC13.91□□□□□ -0.18
Cntn1P12960 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Cntn1P12960 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cntn1P12960 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cntn1P12960 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cntn1P12960 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cntn1P12960 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cntn1P12960 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Cntn1P12960 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cntn1P12960 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC13.91□□□□□ -0.18
Cntn1P12960 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Cntn1P12960 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cntn1P12960 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cntn1P12960 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cntn1P12960 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Cntn1P12960 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Cntn1P12960 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Cntn1P12960 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cntn1P12960 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cntn1P12960 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC13.9□□□□□ -0.18
Cntn1P12960 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cntn1P12960 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Cntn1P12960 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cntn1P12960 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Cntn1P12960 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Cntn1P12960 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Cntn1P12960 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cntn1P12960 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cntn1P12960 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cntn1P12960 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Cntn1P12960 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Cntn1P12960 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Cntn1P12960 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Cntn1P12960 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Cntn1P12960 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Cntn1P12960 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Cntn1P12960 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cntn1P12960 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cntn1P12960 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Cntn1P12960 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC13.9□□□□□ -0.19
Cntn1P12960 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC13.9□□□□□ -0.19
Cntn1P12960 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Cntn1P12960 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cntn1P12960 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cntn1P12960 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cntn1P12960 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cntn1P12960 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms