Protein–RNA interactions for Protein: P11416

Rara, Retinoic acid receptor alpha, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RaraP11416 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
RaraP11416 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RaraP11416 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RaraP11416 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RaraP11416 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
RaraP11416 Gm6944-201ENSMUST00000182449 1006 ntBASIC15.7■□□□□ 0.1
RaraP11416 Gm5177-201ENSMUST00000183092 997 ntBASIC15.7■□□□□ 0.1
RaraP11416 Gm18195-201ENSMUST00000207604 706 ntBASIC15.7■□□□□ 0.1
RaraP11416 AC154222.1-201ENSMUST00000223882 475 ntBASIC15.7■□□□□ 0.1
RaraP11416 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RaraP11416 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RaraP11416 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RaraP11416 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RaraP11416 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RaraP11416 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RaraP11416 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
RaraP11416 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
RaraP11416 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
RaraP11416 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RaraP11416 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
RaraP11416 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
RaraP11416 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
RaraP11416 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RaraP11416 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RaraP11416 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RaraP11416 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RaraP11416 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
RaraP11416 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RaraP11416 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RaraP11416 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RaraP11416 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
RaraP11416 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
RaraP11416 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RaraP11416 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
RaraP11416 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RaraP11416 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RaraP11416 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
RaraP11416 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
RaraP11416 Gm9385-201ENSMUST00000117563 472 ntBASIC15.69■□□□□ 0.1
RaraP11416 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RaraP11416 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC15.69■□□□□ 0.1
RaraP11416 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RaraP11416 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC15.69■□□□□ 0.1
RaraP11416 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RaraP11416 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RaraP11416 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
RaraP11416 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RaraP11416 Gm9252-201ENSMUST00000172364 1602 ntBASIC15.68■□□□□ 0.1
RaraP11416 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RaraP11416 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RaraP11416 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
RaraP11416 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC15.68■□□□□ 0.1
RaraP11416 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
RaraP11416 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
RaraP11416 Gm37411-201ENSMUST00000194180 2282 ntBASIC15.68■□□□□ 0.1
RaraP11416 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RaraP11416 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RaraP11416 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
RaraP11416 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
RaraP11416 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
RaraP11416 Gm14042-201ENSMUST00000120139 833 ntBASIC15.68■□□□□ 0.1
RaraP11416 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RaraP11416 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC15.68■□□□□ 0.1
RaraP11416 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RaraP11416 Gm2651-201ENSMUST00000203560 838 ntBASIC15.68■□□□□ 0.1
RaraP11416 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RaraP11416 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
RaraP11416 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RaraP11416 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RaraP11416 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RaraP11416 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RaraP11416 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
RaraP11416 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RaraP11416 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
RaraP11416 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
RaraP11416 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
RaraP11416 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC15.68■□□□□ 0.1
RaraP11416 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RaraP11416 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RaraP11416 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC15.67■□□□□ 0.1
RaraP11416 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RaraP11416 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
RaraP11416 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC15.67■□□□□ 0.1
RaraP11416 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RaraP11416 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
RaraP11416 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RaraP11416 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RaraP11416 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
RaraP11416 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RaraP11416 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RaraP11416 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC15.67■□□□□ 0.1
RaraP11416 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC15.67■□□□□ 0.1
RaraP11416 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC15.67■□□□□ 0.1
RaraP11416 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RaraP11416 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
RaraP11416 Gm27301-201ENSMUST00000184012 127 ntBASIC15.67■□□□□ 0.1
RaraP11416 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC15.67■□□□□ 0.1
RaraP11416 Gm17968-201ENSMUST00000194902 784 ntBASIC15.67■□□□□ 0.1
RaraP11416 Thap2-203ENSMUST00000218989 527 ntBASIC15.67■□□□□ 0.1
RaraP11416 AC138767.1-201ENSMUST00000222661 415 ntBASIC15.67■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms