Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Ccl3P10855 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC12.77□□□□□ -0.37
Ccl3P10855 Gm12341-201ENSMUST00000119724 503 ntBASIC12.77□□□□□ -0.37
Ccl3P10855 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC12.77□□□□□ -0.37
Ccl3P10855 Gm17150-201ENSMUST00000165577 381 ntBASIC12.77□□□□□ -0.37
Ccl3P10855 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC12.77□□□□□ -0.37
Ccl3P10855 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC12.77□□□□□ -0.37
Ccl3P10855 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC12.77□□□□□ -0.37
Ccl3P10855 AC162801.1-201ENSMUST00000220612 198 ntBASIC12.77□□□□□ -0.37
Ccl3P10855 CT030657.3-201ENSMUST00000222707 1200 ntBASIC12.77□□□□□ -0.37
Ccl3P10855 AC154806.6-201ENSMUST00000228192 202 ntBASIC12.77□□□□□ -0.37
Ccl3P10855 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ccl3P10855 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ccl3P10855 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Ccl3P10855 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Ccl3P10855 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC12.77□□□□□ -0.37
Ccl3P10855 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Ccl3P10855 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC12.77□□□□□ -0.37
Ccl3P10855 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ccl3P10855 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ccl3P10855 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ccl3P10855 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
Ccl3P10855 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ccl3P10855 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ccl3P10855 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Ccl3P10855 Gm14452-201ENSMUST00000118680 1632 ntBASIC12.77□□□□□ -0.37
Ccl3P10855 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ccl3P10855 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Ccl3P10855 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Ccl3P10855 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Ccl3P10855 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccl3P10855 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Ccl3P10855 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccl3P10855 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccl3P10855 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccl3P10855 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Ccl3P10855 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccl3P10855 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccl3P10855 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccl3P10855 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccl3P10855 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Ccl3P10855 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccl3P10855 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccl3P10855 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccl3P10855 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC12.76□□□□□ -0.37
Ccl3P10855 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC12.76□□□□□ -0.37
Ccl3P10855 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC12.76□□□□□ -0.37
Ccl3P10855 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccl3P10855 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC12.76□□□□□ -0.37
Ccl3P10855 Gm27701-201ENSMUST00000184498 110 ntBASIC12.76□□□□□ -0.37
Ccl3P10855 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC12.76□□□□□ -0.37
Ccl3P10855 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC12.76□□□□□ -0.37
Ccl3P10855 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC12.76□□□□□ -0.37
Ccl3P10855 AC153962.4-201ENSMUST00000217878 242 ntBASIC12.76□□□□□ -0.37
Ccl3P10855 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC12.76□□□□□ -0.37
Ccl3P10855 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccl3P10855 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccl3P10855 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccl3P10855 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC12.76□□□□□ -0.37
Ccl3P10855 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccl3P10855 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Ccl3P10855 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccl3P10855 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccl3P10855 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccl3P10855 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC12.76□□□□□ -0.37
Ccl3P10855 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccl3P10855 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccl3P10855 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccl3P10855 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Ccl3P10855 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccl3P10855 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccl3P10855 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccl3P10855 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccl3P10855 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccl3P10855 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Ccl3P10855 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccl3P10855 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC12.75□□□□□ -0.37
Ccl3P10855 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccl3P10855 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
Ccl3P10855 Gm21470-201ENSMUST00000187680 696 ntBASIC12.75□□□□□ -0.37
Ccl3P10855 Gm28911-201ENSMUST00000188837 117 ntBASIC12.75□□□□□ -0.37
Ccl3P10855 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC12.75□□□□□ -0.37
Ccl3P10855 Gm5035-201ENSMUST00000215581 927 ntBASIC12.75□□□□□ -0.37
Ccl3P10855 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Ccl3P10855 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccl3P10855 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccl3P10855 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Ccl3P10855 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccl3P10855 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC12.75□□□□□ -0.37
Ccl3P10855 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccl3P10855 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Ccl3P10855 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccl3P10855 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccl3P10855 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccl3P10855 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Ccl3P10855 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC12.75□□□□□ -0.37
Ccl3P10855 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Ccl3P10855 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC12.75□□□□□ -0.37
Ccl3P10855 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccl3P10855 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms