Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Hoxc9P09633 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Hoxc9P09633 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Hoxc9P09633 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Hoxc9P09633 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC18.69■□□□□ 0.58
Hoxc9P09633 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Hoxc9P09633 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC18.69■□□□□ 0.58
Hoxc9P09633 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Hoxc9P09633 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Hoxc9P09633 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Hoxc9P09633 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Hoxc9P09633 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Hoxc9P09633 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Hoxc9P09633 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC18.69■□□□□ 0.58
Hoxc9P09633 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Hoxc9P09633 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
Hoxc9P09633 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Hoxc9P09633 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Hoxc9P09633 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
Hoxc9P09633 Gm18062-201ENSMUST00000208020 547 ntBASIC18.69■□□□□ 0.58
Hoxc9P09633 Gm18055-201ENSMUST00000208254 547 ntBASIC18.69■□□□□ 0.58
Hoxc9P09633 AC125350.2-201ENSMUST00000224737 727 ntBASIC18.69■□□□□ 0.58
Hoxc9P09633 AC150560.1-201ENSMUST00000227731 1187 ntBASIC18.69■□□□□ 0.58
Hoxc9P09633 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
Hoxc9P09633 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Hoxc9P09633 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC18.69■□□□□ 0.58
Hoxc9P09633 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Hoxc9P09633 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Hoxc9P09633 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Hoxc9P09633 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Hoxc9P09633 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Hoxc9P09633 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Hoxc9P09633 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Hoxc9P09633 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Hoxc9P09633 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Hoxc9P09633 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Hoxc9P09633 Ighv8-14-201ENSMUST00000196781 358 ntBASIC18.68■□□□□ 0.58
Hoxc9P09633 AC102291.3-201ENSMUST00000226566 405 ntBASIC18.68■□□□□ 0.58
Hoxc9P09633 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Hoxc9P09633 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Hoxc9P09633 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Hoxc9P09633 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Hoxc9P09633 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Hoxc9P09633 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Hoxc9P09633 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
Hoxc9P09633 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Hoxc9P09633 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Hoxc9P09633 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Hoxc9P09633 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Hoxc9P09633 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Hoxc9P09633 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC18.67■□□□□ 0.58
Hoxc9P09633 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Hoxc9P09633 Gm37714-201ENSMUST00000194742 342 ntBASIC18.67■□□□□ 0.58
Hoxc9P09633 Gm44608-201ENSMUST00000206827 855 ntBASIC18.67■□□□□ 0.58
Hoxc9P09633 AC156560.2-201ENSMUST00000221232 264 ntBASIC18.67■□□□□ 0.58
Hoxc9P09633 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Hoxc9P09633 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC18.67■□□□□ 0.58
Hoxc9P09633 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Hoxc9P09633 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Hoxc9P09633 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
Hoxc9P09633 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Hoxc9P09633 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Hoxc9P09633 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Hoxc9P09633 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hoxc9P09633 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
Hoxc9P09633 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hoxc9P09633 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hoxc9P09633 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hoxc9P09633 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Hoxc9P09633 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC18.66■□□□□ 0.58
Hoxc9P09633 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC18.66■□□□□ 0.58
Hoxc9P09633 Gm5425-201ENSMUST00000214125 459 ntBASIC18.66■□□□□ 0.58
Hoxc9P09633 Gm7446-201ENSMUST00000221035 1240 ntBASIC18.66■□□□□ 0.58
Hoxc9P09633 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hoxc9P09633 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hoxc9P09633 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hoxc9P09633 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hoxc9P09633 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Hoxc9P09633 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hoxc9P09633 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hoxc9P09633 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Hoxc9P09633 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hoxc9P09633 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hoxc9P09633 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC18.66■□□□□ 0.58
Hoxc9P09633 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hoxc9P09633 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC18.65■□□□□ 0.58
Hoxc9P09633 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Hoxc9P09633 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hoxc9P09633 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Hoxc9P09633 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hoxc9P09633 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hoxc9P09633 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC18.65■□□□□ 0.58
Hoxc9P09633 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hoxc9P09633 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hoxc9P09633 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hoxc9P09633 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC18.65■□□□□ 0.58
Hoxc9P09633 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hoxc9P09633 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Hoxc9P09633 Gm18307-201ENSMUST00000206864 949 ntBASIC18.65■□□□□ 0.58
Hoxc9P09633 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC18.65■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms