Protein–RNA interactions for Protein: P09026

Hoxb3, Homeobox protein Hox-B3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxb3P09026 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Hoxb3P09026 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hoxb3P09026 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hoxb3P09026 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxb3P09026 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxb3P09026 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxb3P09026 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxb3P09026 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxb3P09026 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxb3P09026 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Hoxb3P09026 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxb3P09026 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxb3P09026 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxb3P09026 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxb3P09026 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxb3P09026 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC14.39□□□□□ -0.11
Hoxb3P09026 Gm7993-201ENSMUST00000200970 1384 ntBASIC14.39□□□□□ -0.11
Hoxb3P09026 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxb3P09026 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxb3P09026 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC14.39□□□□□ -0.11
Hoxb3P09026 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxb3P09026 Ighv1-52-201ENSMUST00000103522 348 ntAPPRIS ALT2 BASIC14.39□□□□□ -0.11
Hoxb3P09026 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC14.39□□□□□ -0.11
Hoxb3P09026 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxb3P09026 Gm4691-201ENSMUST00000182339 1000 ntBASIC14.39□□□□□ -0.11
Hoxb3P09026 Gm27533-201ENSMUST00000183800 152 ntBASIC14.39□□□□□ -0.11
Hoxb3P09026 Gm27680-201ENSMUST00000184192 160 ntBASIC14.39□□□□□ -0.11
Hoxb3P09026 Gm2451-201ENSMUST00000199447 999 ntBASIC14.39□□□□□ -0.11
Hoxb3P09026 Gm9728-201ENSMUST00000200197 1055 ntBASIC14.39□□□□□ -0.11
Hoxb3P09026 Gm10290-201ENSMUST00000200451 999 ntBASIC14.39□□□□□ -0.11
Hoxb3P09026 Gm45098-201ENSMUST00000207179 657 ntBASIC14.39□□□□□ -0.11
Hoxb3P09026 AC159246.1-201ENSMUST00000214478 249 ntBASIC14.39□□□□□ -0.11
Hoxb3P09026 Gm9182-201ENSMUST00000217829 639 ntBASIC14.39□□□□□ -0.11
Hoxb3P09026 CT030657.3-201ENSMUST00000222707 1200 ntBASIC14.39□□□□□ -0.11
Hoxb3P09026 AC159006.1-201ENSMUST00000226396 258 ntBASIC14.39□□□□□ -0.11
Hoxb3P09026 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxb3P09026 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxb3P09026 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxb3P09026 Gm10271-201ENSMUST00000092165 156 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Hoxb3P09026 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxb3P09026 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxb3P09026 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxb3P09026 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxb3P09026 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxb3P09026 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Hoxb3P09026 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxb3P09026 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Hoxb3P09026 Gm21009-201ENSMUST00000197169 1669 ntBASIC14.39□□□□□ -0.11
Hoxb3P09026 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxb3P09026 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxb3P09026 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxb3P09026 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxb3P09026 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Hoxb3P09026 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxb3P09026 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Hoxb3P09026 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxb3P09026 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxb3P09026 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxb3P09026 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC14.38□□□□□ -0.11
Hoxb3P09026 Gm20815-201ENSMUST00000115496 1224 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxb3P09026 Gm5940-201ENSMUST00000117582 1068 ntBASIC14.38□□□□□ -0.11
Hoxb3P09026 Gm8749-201ENSMUST00000117737 331 ntBASIC14.38□□□□□ -0.11
Hoxb3P09026 Gm13263-201ENSMUST00000121271 838 ntBASIC14.38□□□□□ -0.11
Hoxb3P09026 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxb3P09026 Gm21812-202ENSMUST00000188908 1224 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxb3P09026 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxb3P09026 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxb3P09026 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxb3P09026 CT010486.3-201ENSMUST00000224555 811 ntBASIC14.38□□□□□ -0.11
Hoxb3P09026 Gm7399-201ENSMUST00000032395 858 ntBASIC14.38□□□□□ -0.11
Hoxb3P09026 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxb3P09026 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxb3P09026 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxb3P09026 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxb3P09026 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxb3P09026 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxb3P09026 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Hoxb3P09026 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Hoxb3P09026 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxb3P09026 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxb3P09026 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Hoxb3P09026 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hoxb3P09026 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Hoxb3P09026 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hoxb3P09026 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Hoxb3P09026 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Hoxb3P09026 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Hoxb3P09026 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hoxb3P09026 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Hoxb3P09026 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
Hoxb3P09026 Gm6944-201ENSMUST00000182449 1006 ntBASIC14.37□□□□□ -0.11
Hoxb3P09026 Id2-201ENSMUST00000020974 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hoxb3P09026 Cklf-210ENSMUST00000212939 737 ntAPPRIS ALT2 TSL 3 BASIC14.37□□□□□ -0.11
Hoxb3P09026 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hoxb3P09026 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hoxb3P09026 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC14.37□□□□□ -0.11
Hoxb3P09026 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hoxb3P09026 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hoxb3P09026 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Hoxb3P09026 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms