Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC14.99□□□□□ -0.01
CopeO89079 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
CopeO89079 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC14.99□□□□□ -0.01
CopeO89079 Gm13464-201ENSMUST00000119418 935 ntBASIC14.99□□□□□ -0.01
CopeO89079 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
CopeO89079 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CopeO89079 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC14.99□□□□□ -0.01
CopeO89079 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC14.99□□□□□ -0.01
CopeO89079 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CopeO89079 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CopeO89079 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC14.99□□□□□ -0.01
CopeO89079 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CopeO89079 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
CopeO89079 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CopeO89079 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
CopeO89079 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
CopeO89079 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
CopeO89079 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CopeO89079 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CopeO89079 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
CopeO89079 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
CopeO89079 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CopeO89079 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
CopeO89079 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
CopeO89079 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CopeO89079 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
CopeO89079 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC14.99□□□□□ -0.01
CopeO89079 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CopeO89079 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CopeO89079 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CopeO89079 AC025913.2-201ENSMUST00000220136 1766 ntBASIC14.98□□□□□ -0.01
CopeO89079 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CopeO89079 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CopeO89079 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CopeO89079 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CopeO89079 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC14.98□□□□□ -0.01
CopeO89079 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CopeO89079 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CopeO89079 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CopeO89079 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC14.98□□□□□ -0.01
CopeO89079 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC14.98□□□□□ -0.01
CopeO89079 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC14.98□□□□□ -0.01
CopeO89079 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CopeO89079 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC14.98□□□□□ -0.01
CopeO89079 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
CopeO89079 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CopeO89079 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
CopeO89079 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CopeO89079 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CopeO89079 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
CopeO89079 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
CopeO89079 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CopeO89079 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
CopeO89079 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CopeO89079 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CopeO89079 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
CopeO89079 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CopeO89079 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CopeO89079 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CopeO89079 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CopeO89079 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CopeO89079 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CopeO89079 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CopeO89079 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CopeO89079 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CopeO89079 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CopeO89079 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CopeO89079 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CopeO89079 AC119177.1-201ENSMUST00000227647 1332 ntBASIC14.97□□□□□ -0.01
CopeO89079 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CopeO89079 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CopeO89079 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CopeO89079 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC14.97□□□□□ -0.01
CopeO89079 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC14.97□□□□□ -0.01
CopeO89079 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CopeO89079 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC14.97□□□□□ -0.01
CopeO89079 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CopeO89079 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
CopeO89079 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC14.97□□□□□ -0.01
CopeO89079 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CopeO89079 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC14.97□□□□□ -0.01
CopeO89079 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
CopeO89079 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC14.97□□□□□ -0.01
CopeO89079 Gm43347-201ENSMUST00000200226 580 ntBASIC14.97□□□□□ -0.01
CopeO89079 Gm45167-201ENSMUST00000208007 322 ntBASIC14.97□□□□□ -0.01
CopeO89079 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CopeO89079 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
CopeO89079 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
CopeO89079 Spr-ps1-201ENSMUST00000089584 605 ntBASIC14.97□□□□□ -0.01
CopeO89079 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CopeO89079 Gm43056-201ENSMUST00000197865 2791 ntBASIC14.97□□□□□ -0.01
CopeO89079 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC14.97□□□□□ -0.01
CopeO89079 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CopeO89079 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC14.97□□□□□ -0.01
CopeO89079 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CopeO89079 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CopeO89079 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CopeO89079 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
CopeO89079 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CopeO89079 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms