Protein–RNA interactions for Protein: O89029

Matn4, Matrilin-4, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Matn4O89029 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Matn4O89029 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Matn4O89029 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Matn4O89029 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Matn4O89029 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Matn4O89029 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Matn4O89029 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC13.71□□□□□ -0.21
Matn4O89029 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Matn4O89029 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Matn4O89029 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Matn4O89029 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Matn4O89029 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Matn4O89029 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Matn4O89029 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Matn4O89029 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC13.71□□□□□ -0.21
Matn4O89029 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Matn4O89029 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Matn4O89029 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Matn4O89029 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Matn4O89029 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Matn4O89029 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC13.71□□□□□ -0.22
Matn4O89029 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Matn4O89029 Gm42872-201ENSMUST00000200026 1967 ntBASIC13.71□□□□□ -0.22
Matn4O89029 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Matn4O89029 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Matn4O89029 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Matn4O89029 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Matn4O89029 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Matn4O89029 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Matn4O89029 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC13.7□□□□□ -0.22
Matn4O89029 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Matn4O89029 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Matn4O89029 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Matn4O89029 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC13.7□□□□□ -0.22
Matn4O89029 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Matn4O89029 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Matn4O89029 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Matn4O89029 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Matn4O89029 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Matn4O89029 Gm16026-204ENSMUST00000162652 683 ntBASIC13.7□□□□□ -0.22
Matn4O89029 Gm42670-201ENSMUST00000201816 1292 ntBASIC13.7□□□□□ -0.22
Matn4O89029 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Matn4O89029 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Matn4O89029 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Matn4O89029 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Matn4O89029 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC13.7□□□□□ -0.22
Matn4O89029 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Matn4O89029 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Matn4O89029 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.22
Matn4O89029 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Matn4O89029 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Matn4O89029 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC13.7□□□□□ -0.22
Matn4O89029 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Matn4O89029 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Matn4O89029 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Matn4O89029 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Matn4O89029 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Matn4O89029 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Matn4O89029 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Matn4O89029 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Matn4O89029 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Matn4O89029 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Matn4O89029 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Matn4O89029 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Matn4O89029 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Matn4O89029 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Matn4O89029 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Matn4O89029 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Matn4O89029 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Matn4O89029 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Matn4O89029 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Matn4O89029 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Matn4O89029 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC13.69□□□□□ -0.22
Matn4O89029 Gm27300-201ENSMUST00000184085 97 ntBASIC13.69□□□□□ -0.22
Matn4O89029 Gm27335-201ENSMUST00000184758 97 ntBASIC13.69□□□□□ -0.22
Matn4O89029 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC13.69□□□□□ -0.22
Matn4O89029 Gm9182-201ENSMUST00000217829 639 ntBASIC13.69□□□□□ -0.22
Matn4O89029 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Matn4O89029 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Matn4O89029 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Matn4O89029 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Matn4O89029 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Matn4O89029 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Matn4O89029 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC13.68□□□□□ -0.22
Matn4O89029 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Matn4O89029 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Matn4O89029 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Matn4O89029 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Matn4O89029 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Matn4O89029 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Matn4O89029 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Matn4O89029 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Matn4O89029 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Matn4O89029 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
Matn4O89029 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Matn4O89029 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Matn4O89029 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Matn4O89029 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Matn4O89029 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Matn4O89029 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms