Protein–RNA interactions for Protein: O88544

Cops4, COP9 signalosome complex subunit 4, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops4O88544 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Cops4O88544 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cops4O88544 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Cops4O88544 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Cops4O88544 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cops4O88544 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cops4O88544 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC13.42□□□□□ -0.26
Cops4O88544 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC13.41□□□□□ -0.26
Cops4O88544 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Cops4O88544 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cops4O88544 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Cops4O88544 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cops4O88544 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cops4O88544 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cops4O88544 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cops4O88544 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cops4O88544 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC13.41□□□□□ -0.26
Cops4O88544 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC13.41□□□□□ -0.26
Cops4O88544 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC13.41□□□□□ -0.26
Cops4O88544 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC13.41□□□□□ -0.26
Cops4O88544 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Cops4O88544 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC13.41□□□□□ -0.26
Cops4O88544 AC160338.1-201ENSMUST00000214232 705 ntBASIC13.41□□□□□ -0.26
Cops4O88544 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cops4O88544 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cops4O88544 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cops4O88544 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cops4O88544 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cops4O88544 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Cops4O88544 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cops4O88544 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cops4O88544 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Cops4O88544 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cops4O88544 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Cops4O88544 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cops4O88544 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Cops4O88544 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Cops4O88544 Gm4081-201ENSMUST00000195287 1838 ntBASIC13.41□□□□□ -0.26
Cops4O88544 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cops4O88544 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Cops4O88544 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cops4O88544 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cops4O88544 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Cops4O88544 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Cops4O88544 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC13.41□□□□□ -0.26
Cops4O88544 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Cops4O88544 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC13.4□□□□□ -0.26
Cops4O88544 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cops4O88544 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cops4O88544 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cops4O88544 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC13.4□□□□□ -0.26
Cops4O88544 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cops4O88544 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cops4O88544 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cops4O88544 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cops4O88544 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cops4O88544 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cops4O88544 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cops4O88544 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cops4O88544 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Cops4O88544 Gm15358-201ENSMUST00000119249 520 ntBASIC13.4□□□□□ -0.26
Cops4O88544 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Cops4O88544 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC13.4□□□□□ -0.26
Cops4O88544 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Cops4O88544 Gm10499-201ENSMUST00000174094 934 ntBASIC13.4□□□□□ -0.26
Cops4O88544 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Cops4O88544 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC13.4□□□□□ -0.26
Cops4O88544 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Cops4O88544 Rbfox2-207ENSMUST00000227533 1041 ntBASIC13.4□□□□□ -0.26
Cops4O88544 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cops4O88544 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Cops4O88544 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cops4O88544 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cops4O88544 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Cops4O88544 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Cops4O88544 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cops4O88544 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cops4O88544 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Cops4O88544 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cops4O88544 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Cops4O88544 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Cops4O88544 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC13.4□□□□□ -0.27
Cops4O88544 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cops4O88544 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Cops4O88544 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cops4O88544 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Cops4O88544 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cops4O88544 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cops4O88544 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cops4O88544 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC13.39□□□□□ -0.27
Cops4O88544 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC13.39□□□□□ -0.27
Cops4O88544 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Cops4O88544 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cops4O88544 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC13.39□□□□□ -0.27
Cops4O88544 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Cops4O88544 Gm13830-205ENSMUST00000201195 1155 ntBASIC13.39□□□□□ -0.27
Cops4O88544 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC13.39□□□□□ -0.27
Cops4O88544 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cops4O88544 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
Cops4O88544 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms