Protein–RNA interactions for Protein: O88384

Vti1b, Vesicle transport through interaction with t-SNAREs homolog 1B, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1bO88384 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC13.86□□□□□ -0.19
Vti1bO88384 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Vti1bO88384 Gm44645-201ENSMUST00000205492 1653 ntBASIC13.86□□□□□ -0.19
Vti1bO88384 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Vti1bO88384 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Vti1bO88384 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Vti1bO88384 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Vti1bO88384 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC13.86□□□□□ -0.19
Vti1bO88384 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC13.86□□□□□ -0.19
Vti1bO88384 Gm44771-201ENSMUST00000206975 626 ntBASIC13.86□□□□□ -0.19
Vti1bO88384 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC13.86□□□□□ -0.19
Vti1bO88384 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Vti1bO88384 CT009510.1-201ENSMUST00000227972 270 ntBASIC13.86□□□□□ -0.19
Vti1bO88384 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Vti1bO88384 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Vti1bO88384 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Vti1bO88384 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC13.86□□□□□ -0.19
Vti1bO88384 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Vti1bO88384 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Vti1bO88384 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Vti1bO88384 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Vti1bO88384 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Vti1bO88384 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC13.86□□□□□ -0.19
Vti1bO88384 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Vti1bO88384 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Vti1bO88384 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Vti1bO88384 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Vti1bO88384 Gm11873-201ENSMUST00000117877 1304 ntBASIC13.86□□□□□ -0.19
Vti1bO88384 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Vti1bO88384 Gm5366-201ENSMUST00000215494 1338 ntBASIC13.86□□□□□ -0.19
Vti1bO88384 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC13.86□□□□□ -0.19
Vti1bO88384 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Vti1bO88384 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC13.86□□□□□ -0.19
Vti1bO88384 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC13.86□□□□□ -0.19
Vti1bO88384 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Vti1bO88384 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Vti1bO88384 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Vti1bO88384 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Vti1bO88384 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vti1bO88384 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vti1bO88384 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vti1bO88384 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vti1bO88384 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Vti1bO88384 Gm43195-201ENSMUST00000200614 2332 ntBASIC13.85□□□□□ -0.19
Vti1bO88384 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vti1bO88384 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC13.85□□□□□ -0.19
Vti1bO88384 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vti1bO88384 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vti1bO88384 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vti1bO88384 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vti1bO88384 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vti1bO88384 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Vti1bO88384 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Vti1bO88384 Gm27300-201ENSMUST00000184085 97 ntBASIC13.85□□□□□ -0.19
Vti1bO88384 Gm27335-201ENSMUST00000184758 97 ntBASIC13.85□□□□□ -0.19
Vti1bO88384 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Vti1bO88384 Psmb5-202ENSMUST00000227257 622 ntBASIC13.85□□□□□ -0.19
Vti1bO88384 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vti1bO88384 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vti1bO88384 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Vti1bO88384 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Vti1bO88384 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vti1bO88384 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vti1bO88384 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Vti1bO88384 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vti1bO88384 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Vti1bO88384 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vti1bO88384 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vti1bO88384 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vti1bO88384 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Vti1bO88384 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Vti1bO88384 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC13.84□□□□□ -0.19
Vti1bO88384 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Vti1bO88384 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Vti1bO88384 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Vti1bO88384 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Vti1bO88384 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC13.84□□□□□ -0.19
Vti1bO88384 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC13.84□□□□□ -0.19
Vti1bO88384 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Vti1bO88384 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Vti1bO88384 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Vti1bO88384 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC13.84□□□□□ -0.19
Vti1bO88384 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC13.84□□□□□ -0.19
Vti1bO88384 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Vti1bO88384 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Vti1bO88384 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Vti1bO88384 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Vti1bO88384 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Vti1bO88384 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Vti1bO88384 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Vti1bO88384 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Vti1bO88384 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Vti1bO88384 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Vti1bO88384 Celf4-206ENSMUST00000224553 1729 ntBASIC13.84□□□□□ -0.19
Vti1bO88384 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Vti1bO88384 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Vti1bO88384 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Vti1bO88384 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC13.84□□□□□ -0.19
Vti1bO88384 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Vti1bO88384 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 67.4 ms