Protein–RNA interactions for Protein: O88207

Col5a1, Collagen alpha-1(V) chain, mousemouse

Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1O88207 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC12.91□□□□□ -0.34
Col5a1O88207 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col5a1O88207 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Col5a1O88207 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col5a1O88207 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col5a1O88207 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Col5a1O88207 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col5a1O88207 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col5a1O88207 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC12.91□□□□□ -0.34
Col5a1O88207 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col5a1O88207 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC12.91□□□□□ -0.34
Col5a1O88207 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Col5a1O88207 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col5a1O88207 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC12.91□□□□□ -0.34
Col5a1O88207 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC12.91□□□□□ -0.34
Col5a1O88207 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Col5a1O88207 Mir8109-201ENSMUST00000184375 117 ntBASIC12.91□□□□□ -0.34
Col5a1O88207 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC12.91□□□□□ -0.34
Col5a1O88207 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC12.91□□□□□ -0.34
Col5a1O88207 Gm18027-201ENSMUST00000218947 619 ntBASIC12.91□□□□□ -0.34
Col5a1O88207 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Col5a1O88207 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col5a1O88207 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Col5a1O88207 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col5a1O88207 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col5a1O88207 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Col5a1O88207 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col5a1O88207 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col5a1O88207 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Col5a1O88207 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col5a1O88207 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC12.91□□□□□ -0.34
Col5a1O88207 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC12.91□□□□□ -0.34
Col5a1O88207 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col5a1O88207 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Col5a1O88207 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col5a1O88207 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC12.9□□□□□ -0.34
Col5a1O88207 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Col5a1O88207 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Col5a1O88207 Gm5940-201ENSMUST00000117582 1068 ntBASIC12.9□□□□□ -0.34
Col5a1O88207 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC12.9□□□□□ -0.34
Col5a1O88207 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC12.9□□□□□ -0.34
Col5a1O88207 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC12.9□□□□□ -0.34
Col5a1O88207 Gm18054-201ENSMUST00000207539 555 ntBASIC12.9□□□□□ -0.34
Col5a1O88207 Gm7446-201ENSMUST00000221035 1240 ntBASIC12.9□□□□□ -0.34
Col5a1O88207 Gm7399-201ENSMUST00000032395 858 ntBASIC12.9□□□□□ -0.34
Col5a1O88207 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col5a1O88207 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC12.9□□□□□ -0.34
Col5a1O88207 Gm44645-201ENSMUST00000205492 1653 ntBASIC12.9□□□□□ -0.34
Col5a1O88207 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col5a1O88207 Gm9768-201ENSMUST00000206007 2861 ntBASIC12.9□□□□□ -0.34
Col5a1O88207 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Col5a1O88207 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Col5a1O88207 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC12.9□□□□□ -0.34
Col5a1O88207 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Col5a1O88207 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col5a1O88207 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col5a1O88207 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col5a1O88207 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col5a1O88207 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col5a1O88207 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col5a1O88207 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col5a1O88207 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC12.9□□□□□ -0.34
Col5a1O88207 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col5a1O88207 Gm18056-201ENSMUST00000207670 568 ntBASIC12.9□□□□□ -0.34
Col5a1O88207 Gm18061-201ENSMUST00000208350 562 ntBASIC12.9□□□□□ -0.34
Col5a1O88207 Gm18063-201ENSMUST00000208529 568 ntBASIC12.9□□□□□ -0.34
Col5a1O88207 Gm18052-201ENSMUST00000208750 559 ntBASIC12.9□□□□□ -0.34
Col5a1O88207 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Col5a1O88207 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC12.9□□□□□ -0.34
Col5a1O88207 AC110817.1-201ENSMUST00000225706 605 ntBASIC12.9□□□□□ -0.34
Col5a1O88207 AC154846.1-201ENSMUST00000226278 862 ntBASIC12.9□□□□□ -0.34
Col5a1O88207 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Col5a1O88207 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC12.9□□□□□ -0.34
Col5a1O88207 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Col5a1O88207 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Col5a1O88207 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col5a1O88207 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Col5a1O88207 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Col5a1O88207 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC12.9□□□□□ -0.35
Col5a1O88207 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col5a1O88207 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col5a1O88207 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col5a1O88207 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC12.89□□□□□ -0.35
Col5a1O88207 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col5a1O88207 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col5a1O88207 Gm10327-201ENSMUST00000105222 1002 ntBASIC12.89□□□□□ -0.35
Col5a1O88207 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col5a1O88207 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC12.89□□□□□ -0.35
Col5a1O88207 Gm15957-201ENSMUST00000118893 974 ntBASIC12.89□□□□□ -0.35
Col5a1O88207 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Col5a1O88207 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col5a1O88207 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC12.89□□□□□ -0.35
Col5a1O88207 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC12.89□□□□□ -0.35
Col5a1O88207 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Col5a1O88207 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col5a1O88207 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col5a1O88207 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Col5a1O88207 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Col5a1O88207 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col5a1O88207 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 50.1 ms