Protein–RNA interactions for Protein: O55187

Cbx4, E3 SUMO-protein ligase CBX4, mousemouse

Predictions only

Length 551 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cbx4O55187 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Cbx4O55187 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cbx4O55187 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC14.22□□□□□ -0.13
Cbx4O55187 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cbx4O55187 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC14.22□□□□□ -0.13
Cbx4O55187 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cbx4O55187 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cbx4O55187 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Cbx4O55187 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cbx4O55187 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Cbx4O55187 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cbx4O55187 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cbx4O55187 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Cbx4O55187 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Cbx4O55187 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
Cbx4O55187 Gm14451-201ENSMUST00000121581 1542 ntBASIC14.21□□□□□ -0.13
Cbx4O55187 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Cbx4O55187 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cbx4O55187 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Cbx4O55187 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Cbx4O55187 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
Cbx4O55187 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cbx4O55187 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Cbx4O55187 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cbx4O55187 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Cbx4O55187 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC14.21□□□□□ -0.13
Cbx4O55187 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Cbx4O55187 Gm5479-201ENSMUST00000160578 435 ntBASIC14.21□□□□□ -0.13
Cbx4O55187 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC14.21□□□□□ -0.13
Cbx4O55187 Gm2213-201ENSMUST00000197485 688 ntBASIC14.21□□□□□ -0.13
Cbx4O55187 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Cbx4O55187 CT943659.1-201ENSMUST00000215459 326 ntBASIC14.21□□□□□ -0.13
Cbx4O55187 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cbx4O55187 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cbx4O55187 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cbx4O55187 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Cbx4O55187 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Cbx4O55187 Gm38042-201ENSMUST00000191614 5208 ntBASIC14.21□□□□□ -0.13
Cbx4O55187 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Cbx4O55187 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Cbx4O55187 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.14
Cbx4O55187 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC14.21□□□□□ -0.14
Cbx4O55187 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Cbx4O55187 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Cbx4O55187 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Cbx4O55187 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Cbx4O55187 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC14.21□□□□□ -0.14
Cbx4O55187 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cbx4O55187 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cbx4O55187 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Cbx4O55187 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cbx4O55187 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC14.2□□□□□ -0.14
Cbx4O55187 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC14.2□□□□□ -0.14
Cbx4O55187 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cbx4O55187 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cbx4O55187 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC14.2□□□□□ -0.14
Cbx4O55187 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cbx4O55187 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC14.2□□□□□ -0.14
Cbx4O55187 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cbx4O55187 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC14.2□□□□□ -0.14
Cbx4O55187 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC14.2□□□□□ -0.14
Cbx4O55187 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cbx4O55187 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC14.2□□□□□ -0.14
Cbx4O55187 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC14.2□□□□□ -0.14
Cbx4O55187 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC14.2□□□□□ -0.14
Cbx4O55187 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cbx4O55187 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC14.2□□□□□ -0.14
Cbx4O55187 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cbx4O55187 Gm10175-201ENSMUST00000086013 645 ntBASIC14.2□□□□□ -0.14
Cbx4O55187 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cbx4O55187 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cbx4O55187 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cbx4O55187 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cbx4O55187 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cbx4O55187 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC14.2□□□□□ -0.14
Cbx4O55187 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cbx4O55187 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cbx4O55187 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC14.19□□□□□ -0.14
Cbx4O55187 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cbx4O55187 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cbx4O55187 Gm45760-201ENSMUST00000212190 1782 ntBASIC14.19□□□□□ -0.14
Cbx4O55187 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Cbx4O55187 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cbx4O55187 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cbx4O55187 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cbx4O55187 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cbx4O55187 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cbx4O55187 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cbx4O55187 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cbx4O55187 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cbx4O55187 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cbx4O55187 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC14.19□□□□□ -0.14
Cbx4O55187 Gm25911-201ENSMUST00000157621 56 ntBASIC14.19□□□□□ -0.14
Cbx4O55187 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cbx4O55187 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC14.19□□□□□ -0.14
Cbx4O55187 Gm20553-201ENSMUST00000204205 844 ntBASIC14.19□□□□□ -0.14
Cbx4O55187 Klk2-ps-201ENSMUST00000205342 571 ntBASIC14.19□□□□□ -0.14
Cbx4O55187 AC155729.1-201ENSMUST00000227758 544 ntBASIC14.19□□□□□ -0.14
Cbx4O55187 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cbx4O55187 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 66.3 ms