Protein–RNA interactions for Protein: O35627

Nr1i3, Nuclear receptor subfamily 1 group I member 3, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1i3O35627 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC15.59■□□□□ 0.09
Nr1i3O35627 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC15.59■□□□□ 0.09
Nr1i3O35627 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Nr1i3O35627 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
Nr1i3O35627 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Nr1i3O35627 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Nr1i3O35627 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC15.59■□□□□ 0.09
Nr1i3O35627 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Nr1i3O35627 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC15.59■□□□□ 0.09
Nr1i3O35627 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Nr1i3O35627 Ssr1-204ENSMUST00000225319 1610 ntBASIC15.59■□□□□ 0.09
Nr1i3O35627 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC15.59■□□□□ 0.09
Nr1i3O35627 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Nr1i3O35627 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Nr1i3O35627 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Nr1i3O35627 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Nr1i3O35627 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Nr1i3O35627 AC154572.2-201ENSMUST00000225105 997 ntBASIC15.59■□□□□ 0.09
Nr1i3O35627 Psmb5-202ENSMUST00000227257 622 ntBASIC15.59■□□□□ 0.09
Nr1i3O35627 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Nr1i3O35627 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Nr1i3O35627 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Nr1i3O35627 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Nr1i3O35627 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Nr1i3O35627 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Nr1i3O35627 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC15.59■□□□□ 0.09
Nr1i3O35627 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Nr1i3O35627 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Nr1i3O35627 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Nr1i3O35627 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Nr1i3O35627 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC15.58■□□□□ 0.09
Nr1i3O35627 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Nr1i3O35627 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Nr1i3O35627 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Nr1i3O35627 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Nr1i3O35627 Gm26513-201ENSMUST00000181802 2489 ntBASIC15.58■□□□□ 0.09
Nr1i3O35627 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Nr1i3O35627 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Nr1i3O35627 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Nr1i3O35627 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.09
Nr1i3O35627 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Nr1i3O35627 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Nr1i3O35627 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Nr1i3O35627 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Nr1i3O35627 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Nr1i3O35627 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Nr1i3O35627 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Nr1i3O35627 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Nr1i3O35627 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Nr1i3O35627 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Nr1i3O35627 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Nr1i3O35627 Gm17968-201ENSMUST00000194902 784 ntBASIC15.58■□□□□ 0.08
Nr1i3O35627 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC15.58■□□□□ 0.08
Nr1i3O35627 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Nr1i3O35627 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Nr1i3O35627 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Nr1i3O35627 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Nr1i3O35627 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
Nr1i3O35627 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC15.58■□□□□ 0.08
Nr1i3O35627 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC15.58■□□□□ 0.08
Nr1i3O35627 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Nr1i3O35627 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Nr1i3O35627 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Nr1i3O35627 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Nr1i3O35627 Gm37411-201ENSMUST00000194180 2282 ntBASIC15.57■□□□□ 0.08
Nr1i3O35627 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Nr1i3O35627 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Nr1i3O35627 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Nr1i3O35627 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Nr1i3O35627 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Nr1i3O35627 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Nr1i3O35627 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Nr1i3O35627 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Nr1i3O35627 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Nr1i3O35627 Gm18733-201ENSMUST00000173950 856 ntBASIC15.57■□□□□ 0.08
Nr1i3O35627 CT025555.1-201ENSMUST00000225901 1217 ntBASIC15.57■□□□□ 0.08
Nr1i3O35627 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Nr1i3O35627 Gm7461-201ENSMUST00000058918 827 ntBASIC15.57■□□□□ 0.08
Nr1i3O35627 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Nr1i3O35627 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Nr1i3O35627 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Nr1i3O35627 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Nr1i3O35627 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Nr1i3O35627 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Nr1i3O35627 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Nr1i3O35627 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Nr1i3O35627 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC15.56■□□□□ 0.08
Nr1i3O35627 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Nr1i3O35627 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Nr1i3O35627 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Nr1i3O35627 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Nr1i3O35627 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Nr1i3O35627 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Nr1i3O35627 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Nr1i3O35627 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Nr1i3O35627 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Nr1i3O35627 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC15.56■□□□□ 0.08
Nr1i3O35627 Gm44945-201ENSMUST00000206764 1187 ntBASIC15.56■□□□□ 0.08
Nr1i3O35627 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
Nr1i3O35627 AC123645.1-201ENSMUST00000228469 605 ntBASIC15.56■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 110.3 ms