Protein–RNA interactions for Protein: O35218

Cpsf2, Cleavage and polyadenylation specificity factor subunit 2, mousemouse

Known RBP Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf2O35218 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cpsf2O35218 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Cpsf2O35218 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cpsf2O35218 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cpsf2O35218 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cpsf2O35218 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC15.55■□□□□ 0.08
Cpsf2O35218 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC15.55■□□□□ 0.08
Cpsf2O35218 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cpsf2O35218 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Cpsf2O35218 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Cpsf2O35218 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC15.55■□□□□ 0.08
Cpsf2O35218 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC15.55■□□□□ 0.08
Cpsf2O35218 AC131709.1-201ENSMUST00000224731 1180 ntBASIC15.55■□□□□ 0.08
Cpsf2O35218 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cpsf2O35218 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cpsf2O35218 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cpsf2O35218 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Cpsf2O35218 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Cpsf2O35218 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cpsf2O35218 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cpsf2O35218 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cpsf2O35218 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cpsf2O35218 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Cpsf2O35218 Tcf21-202ENSMUST00000218002 1788 ntBASIC15.54■□□□□ 0.08
Cpsf2O35218 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cpsf2O35218 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cpsf2O35218 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cpsf2O35218 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cpsf2O35218 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cpsf2O35218 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC15.54■□□□□ 0.08
Cpsf2O35218 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cpsf2O35218 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cpsf2O35218 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC15.54■□□□□ 0.08
Cpsf2O35218 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Cpsf2O35218 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC15.54■□□□□ 0.08
Cpsf2O35218 Gm42670-201ENSMUST00000201816 1292 ntBASIC15.54■□□□□ 0.08
Cpsf2O35218 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC15.54■□□□□ 0.08
Cpsf2O35218 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cpsf2O35218 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cpsf2O35218 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cpsf2O35218 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cpsf2O35218 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cpsf2O35218 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Cpsf2O35218 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Cpsf2O35218 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC15.54■□□□□ 0.08
Cpsf2O35218 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
Cpsf2O35218 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cpsf2O35218 Gm4081-201ENSMUST00000195287 1838 ntBASIC15.54■□□□□ 0.08
Cpsf2O35218 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Cpsf2O35218 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Cpsf2O35218 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cpsf2O35218 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Cpsf2O35218 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC15.54■□□□□ 0.08
Cpsf2O35218 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cpsf2O35218 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Cpsf2O35218 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cpsf2O35218 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cpsf2O35218 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cpsf2O35218 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC15.53■□□□□ 0.08
Cpsf2O35218 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cpsf2O35218 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC15.53■□□□□ 0.08
Cpsf2O35218 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Cpsf2O35218 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Cpsf2O35218 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Cpsf2O35218 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Cpsf2O35218 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cpsf2O35218 Gm44981-201ENSMUST00000205549 1943 ntBASIC15.53■□□□□ 0.08
Cpsf2O35218 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cpsf2O35218 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Cpsf2O35218 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cpsf2O35218 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cpsf2O35218 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cpsf2O35218 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cpsf2O35218 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cpsf2O35218 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Cpsf2O35218 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cpsf2O35218 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cpsf2O35218 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cpsf2O35218 AC131743.5-201ENSMUST00000220775 1618 ntBASIC15.53■□□□□ 0.08
Cpsf2O35218 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cpsf2O35218 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Cpsf2O35218 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Cpsf2O35218 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC15.53■□□□□ 0.08
Cpsf2O35218 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cpsf2O35218 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Cpsf2O35218 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC15.52■□□□□ 0.08
Cpsf2O35218 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC15.52■□□□□ 0.08
Cpsf2O35218 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC15.52■□□□□ 0.08
Cpsf2O35218 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC15.52■□□□□ 0.08
Cpsf2O35218 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Cpsf2O35218 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC15.52■□□□□ 0.08
Cpsf2O35218 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Cpsf2O35218 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Cpsf2O35218 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Cpsf2O35218 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Cpsf2O35218 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC15.52■□□□□ 0.07
Cpsf2O35218 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Cpsf2O35218 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC15.52■□□□□ 0.07
Cpsf2O35218 Gm21451-201ENSMUST00000111062 2775 ntBASIC15.52■□□□□ 0.07
Cpsf2O35218 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 56.2 ms